contig_metadata
3 rows where analysis = "diamond", bioproject = "PRJNA728642" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26640750 | 26640750 | PRJNA728642_P_NODE_20001_length_230_cov_2.280255_g19730_i0 | PRJNA728642 | 20001 | 230 | 2.280255 | 5.2445865 | Phodopus roborovskii | 109678 | Chordata | Chordata | 43.1 | 0.0226 | NR | XP_051031607.1 | 109678 | g19730 | i0 | 33.9 | 0.808695652173913 | 62 | 39 | 80.9 | 1 | 17 | 202 | 33 | 92 | XP_051031607.1 LOW QUALITY PROTEIN: mucin-12-like, partial [Phodopus roborovskii] | diamond | 186 | 43.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Cricetidae | Phodopus | Phodopus roborovskii | |
| 27431790 | 27431790 | PRJNA728642_P_NODE_10463_length_313_cov_2.566667_g10192_i0 | PRJNA728642 | 10463 | 313 | 2.566667 | 8.03366771 | Microcaecilia unicolor | 1415580 | Chordata | Chordata | 44.7 | 0.0189 | NR | XP_030045814.1 | 1415580 | g10192 | i0 | 34.9 | 0.603833865814696 | 63 | 39 | 58.5 | 1 | 58 | 240 | 754 | 816 | XP_030045814.1 LOW QUALITY PROTEIN: thyroglobulin [Microcaecilia unicolor] | diamond | 189 | 44.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Gymnophiona | Siphonopidae | Microcaecilia | Microcaecilia unicolor | |
| 30937140 | 30937140 | PRJNA728642_P_NODE_11734_length_295_cov_1.004505_g11463_i0 | PRJNA728642 | 11734 | 295 | 1.004505 | 2.96328975 | Sus scrofa | 9823 | Chordata | Chordata | 197 | 1.11e-58 | NR | XP_020938199.1 | 9823 | g11463 | i0 | 99 | 2.98983050847458 | 98 | 1 | 99.7 | 0 | 2 | 295 | 324 | 421 | XP_020938199.1 ribonuclease inhibitor isoform X2 [Sus scrofa] | diamond | 882 | 197 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;