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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA728642" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 35 ✖

bioproject 1

  • PRJNA728642 · 35 ✖

analysis 1

  • diamond · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10917045 10917045 PRJNA728642_P_NODE_6969_length_388_cov_0.977778_g6698_i0 PRJNA728642 6969 388 0.977778 3.79377864 Trema orientale 63057 Plants Plants 194 5.06e-58   NR PON77124.1 63057 g6698 i0 68 0.989690721649485 128 41 99 0 388 5 64 191 PON77124.1 Glycoside hydrolase [Trema orientale] diamond 384 194 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
13466488 13466488 PRJNA728642_P_NODE_13591_length_273_cov_1.270000_g13320_i0 PRJNA728642 13591 273 1.27 3.4671 Brassicaceae 3700 Plants Plants 169 1.4299999999999999e-46   NR XP_056849743.1 3726 g13320 i0 82.4 4 91 16 100 0 273 1 1252 1342 XP_056849743.1 transposon Tf2-1 polyprotein isoform X1 [Raphanus sativus] diamond 1092 170 0.994117647058824 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Raphanus Raphanus sativus
13466681 13466681 PRJNA728642_P_NODE_5271_length_448_cov_2.560000_g5000_i0 PRJNA728642 5271 448 2.56 11.4688 Morus notabilis 981085 Plants Plants 201 8.63e-64   NR EXC00007.1 981085 g5000 i0 94 0.669642857142857 100 6 67 0 115 414 1 100 EXC00007.1 hypothetical protein L484_005820 [Morus notabilis] diamond 300 201 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Morus Morus notabilis
19839713 19839713 PRJNA728642_P_NODE_13456_length_274_cov_1.532338_g13185_i0 PRJNA728642 13456 274 1.532338 4.19860612 Magnoliopsida 3398 Plants Plants 155 6.87e-42   NR KAF8410903.1 13715 g13185 i0 78 4.98175182481752 91 20 99.6 0 2 274 29 119 KAF8410903.1 hypothetical protein HHK36_003440 [Tetracentron sinense] diamond 1365 156 0.993589743589744 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Trochodendrales Trochodendraceae Tetracentron Tetracentron sinense
19839714 19839714 PRJNA728642_P_NODE_13476_length_274_cov_1.417910_g13205_i0 PRJNA728642 13476 274 1.41791 3.8850734 Ficus carica 3494 Plants Plants 174 4.63e-50   NR GMN50786.1 3494 g13205 i0 87.8 4.92700729927007 90 11 98.5 0 272 3 273 362 GMN50786.1 hypothetical protein TIFTF001_019943 [Ficus carica] diamond 1350 174 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Ficus Ficus carica
23665899 23665899 PRJNA728642_P_NODE_19219_length_242_cov_0.911243_g18948_i0 PRJNA728642 19219 242 0.911243 2.20520806 Arachis hypogaea 3818 Plants Plants 71.2 3.97e-13   NR ABH09321.1 3818 g18948 i0 54.2 0.731404958677686 59 27 73.1 0 242 66 71 129 ABH09321.1 leucine rich protein [Arachis hypogaea] diamond 177 71.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Arachis Arachis hypogaea
26925741 26925741 PRJNA728642_P_NODE_10042_length_321_cov_0.883065_g9771_i0 PRJNA728642 10042 321 0.883065 2.83463865 Salix suchowensis 1278906 Plants Plants 119 2.15e-32   NR KAG5224815.1 1278906 g9771 i0 98.1 1.48598130841122 53 1 49.5 0 320 162 44 96 KAG5224815.1 protein RALF [Salix suchowensis] diamond 477 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix suchowensis
27115311 27115311 PRJNA728642_P_NODE_14742_length_261_cov_1.494681_g14471_i0 PRJNA728642 14742 261 1.494681 3.90111741 Salix brachista 2182728 Plants Plants 159 5.94e-48   NR KAB5530133.1 2182728 g14471 i0 91.5 0.942528735632184 82 7 94.3 0 260 15 74 155 KAB5530133.1 hypothetical protein DKX38_020214 [Salix brachista] diamond 246 159 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix brachista
27146679 27146679 PRJNA728642_P_NODE_5962_length_421_cov_1.327586_g5691_i0 PRJNA728642 5962 421 1.327586 5.58913706 Salix dunnii 1413687 Plants Plants 209 5.34e-65   NR KAF9688169.1 1413687 g5691 i0 88.1 1.07600950118765 151 5 98.3 1 414 1 1 151 KAF9688169.1 hypothetical protein SADUNF_Sadunf02G0169200 [Salix dunnii] diamond 453 209 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix dunnii
27526259 27526259 PRJNA728642_P_NODE_7163_length_382_cov_1.838188_g6892_i0 PRJNA728642 7163 382 1.838188 7.02187816 Morus notabilis 981085 Plants Plants 141 2.63e-41   NR EXB51901.1 981085 g6892 i0 89.2 0.581151832460733 74 8 58.1 0 61 282 1 74 EXB51901.1 hypothetical protein L484_006246 [Morus notabilis] diamond 222 141 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Morus Morus notabilis
27810628 27810628 PRJNA728642_P_NODE_18904_length_243_cov_0.905882_g18633_i0 PRJNA728642 18904 243 0.905882 2.20129326 Trema orientale 63057 Plants Plants 44.7 0.00258   NR PON96497.1 63057 g18633 i0 40.6 0.790123456790123 64 37 79 1 238 47 51 113 PON96497.1 Rapid ALkalinization Factor [Trema orientale] diamond 192 44.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
27841870 27841870 PRJNA728642_P_NODE_17244_length_247_cov_0.885057_g16973_i0 PRJNA728642 17244 247 0.885057 2.18609079 Trema orientale 63057 Plants Plants 139 1.73e-36   NR PON52540.1 63057 g16973 i0 82.9 0.995951417004049 82 13 99.6 1 2 247 248 328 PON52540.1 Pectinesterase inhibitor domain containing protein [Trema orientale] diamond 246 139 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
28505024 28505024 PRJNA728642_P_NODE_15107_length_257_cov_2.320652_g14836_i0 PRJNA728642 15107 257 2.320652 5.96407564 Citrus sinensis 2711 Plants Plants 44.7 9.32e-4   NR XP_006482335.1 2711 g14836 i0 91.3 0.268482490272374 23 2 26.8 0 3 71 45 67 XP_006482335.1 stress-induced protein KIN2-like [Citrus sinensis] diamond 69 44.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
28694724 28694724 PRJNA728642_P_NODE_13667_length_272_cov_1.547739_g13396_i0 PRJNA728642 13667 272 1.547739 4.20985008 Salix suchowensis 1278906 Plants Plants 149 5.38e-45   NR KAJ6306623.1 1278906 g13396 i0 94.6 0.816176470588235 74 4 81.6 0 244 23 1 74 KAJ6306623.1 hypothetical protein OIU78_021862 [Salix suchowensis] diamond 222 149 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix suchowensis
28767868 28767868 PRJNA728642_P_NODE_20187_length_202_cov_4.279070_g19916_i0 PRJNA728642 20187 202 4.27907 8.6437214 Populus 3689 Plants Plants 86.7 2.7e-20   NR KAG6771892.1 118781 g19916 i0 91.5 2.09405940594059 47 4 69.8 0 61 201 35 81 KAG6771892.1 hypothetical protein POTOM_023285 [Populus tomentosa] diamond 423 86.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Populus Populus tomentosa
28947352 28947352 PRJNA728642_P_NODE_15768_length_251_cov_1.297753_g15497_i0 PRJNA728642 15768 251 1.297753 3.25736003 Salix dunnii 1413687 Plants Plants 101 2.3e-25   NR KAF9666317.1 1413687 g15497 i0 80.7 0.99203187250996006 83 16 99.2 0 1 249 16 98 KAF9666317.1 hypothetical protein SADUNF_Sadunf16G0217000 [Salix dunnii] diamond 249 101 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix dunnii
29483612 29483612 PRJNA728642_P_NODE_17290_length_247_cov_0.885057_g17019_i0 PRJNA728642 17290 247 0.885057 2.18609079 Brassica napus 3708 Plants Plants 174 2.4499999999999994e-52   NR CAF2085644.1 3708 g17019 i0 100 1.9919028340081 82 0 99.6 0 246 1 79 160 CAF2085644.1 unnamed protein product [Brassica napus] diamond 492 174 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
29894474 29894474 PRJNA728642_P_NODE_12351_length_287_cov_1.172897_g12080_i0 PRJNA728642 12351 287 1.172897 3.36621439 Trema orientale 63057 Plants Plants 69.3 7.95e-13   NR PON96496.1 63057 g12080 i0 56.3 1.48432055749129 71 30 73.2 1 73 282 1 71 PON96496.1 hypothetical protein TorRG33x02_077690 [Trema orientale] diamond 426 69.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
30052139 30052139 PRJNA728642_P_NODE_6431_length_404_cov_2.555891_g6160_i0 PRJNA728642 6431 404 2.555891 10.32579964 Brassica napus 3708 Plants Plants 262 1.14e-80   NR CAF2115745.1 3708 g6160 i0 100 0.995049504950495 134 0 99.5 0 402 1 501 634 CAF2115745.1 unnamed protein product [Brassica napus] diamond 402 262 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
30526201 30526201 PRJNA728642_P_NODE_15813_length_251_cov_0.865169_g15542_i0 PRJNA728642 15813 251 0.865169 2.17157419 Platanthera zijinensis 2320716 Plants Plants 135 9.279999999999999e-35   NR KAK8919251.1 2320716 g15542 i0 73.5 1.9840637450199201 83 22 99.2 0 250 2 6 88 KAK8919251.1 hypothetical protein KSP39_PZI022114 [Platanthera zijinensis] diamond 498 135 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Platanthera Platanthera zijinensis
30526202 30526202 PRJNA728642_P_NODE_18593_length_243_cov_1.629412_g18322_i0 PRJNA728642 18593 243 1.629412 3.95947116 Salix koriyanagi 2511006 Plants Plants 92.4 2.04e-22   NR KAJ6694598.1 2511006 g18322 i0 95.3 0.530864197530864 43 2 53.1 0 177 49 46 88 KAJ6694598.1 ARABINOGALACTAN PEPTIDE 1 [Salix koriyanagi] diamond 129 92.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix koriyanagi
30747465 30747465 PRJNA728642_P_NODE_6754_length_394_cov_1.439252_g6483_i0 PRJNA728642 6754 394 1.439252 5.67065288 Morus notabilis 981085 Plants Plants 161 7.19e-49   NR EXC08460.1 981085 g6483 i0 87.8 0.624365482233503 82 10 62.4 0 149 394 1 82 EXC08460.1 hypothetical protein L484_009603 [Morus notabilis] diamond 246 161 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Morus Morus notabilis
30779027 30779027 PRJNA728642_P_NODE_12114_length_289_cov_2.041667_g11843_i0 PRJNA728642 12114 289 2.041667 5.90041763 Salix suchowensis 1278906 Plants Plants 160 3.51e-49   NR KAG5248734.1 1278906 g11843 i0 96.5 0.892733564013841 86 3 89.3 0 259 2 1 86 KAG5248734.1 late embryogenesis abundant protein [Salix suchowensis] diamond 258 160 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix suchowensis
30905519 30905519 PRJNA728642_P_NODE_6854_length_391_cov_1.216981_g6583_i0 PRJNA728642 6854 391 1.216981 4.75839571 Salix suchowensis 1278906 Plants Plants 237 4.87e-76   NR KAJ6397467.1 1278906 g6583 i0 93.8 2.9693094629156 129 8 99 0 390 4 102 230 KAJ6397467.1 hypothetical protein OIU77_018474 [Salix suchowensis] diamond 1161 237 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix suchowensis
30937143 30937143 PRJNA728642_P_NODE_16914_length_248_cov_0.880000_g16643_i0 PRJNA728642 16914 248 0.88 2.1824 Trema orientale 63057 Plants Plants 143 7.82e-39   NR PON91430.1 63057 g16643 i0 74.1 1.95967741935484 81 21 98 0 243 1 337 417 PON91430.1 Lipase [Trema orientale] diamond 486 143 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Trema Trema orientale
31284514 31284514 PRJNA728642_P_NODE_8675_length_345_cov_3.955882_g8404_i0 PRJNA728642 8675 345 3.955882 13.6477929 Salix dunnii 1413687 Plants Plants 221 3.25e-72   NR KAF9661666.1 1413687 g8404 i0 95.3 0.930434782608696 107 5 93 0 1 321 31 137 KAF9661666.1 hypothetical protein SADUNF_Sadunf19G0092400 [Salix dunnii] diamond 321 221 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix dunnii
31601083 31601083 PRJNA728642_P_NODE_10776_length_309_cov_1.110169_g10505_i0 PRJNA728642 10776 309 1.110169 3.43042221 Humulus lupulus 3486 Plants Plants 169 3.19e-46   NR XP_062104424.1 3486 g10505 i0 79.8 4.74757281553398 99 20 96.1 0 13 309 849 947 XP_062104424.1 uncharacterized protein LOC133815624 [Humulus lupulus] diamond 1467 169 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
31642663 31642663 PRJNA728642_P_NODE_11496_length_298_cov_1.844444_g11225_i0 PRJNA728642 11496 298 1.844444 5.49644312 Salix 40685 Plants Plants 178 1.32e-53   NR KAJ6305958.1 1278906 g11225 i0 95.9 3.94630872483221 98 4 98.7 0 296 3 118 215 KAJ6305958.1 hypothetical protein OIU78_021316 [Salix suchowensis] diamond 1176 178 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix suchowensis
31727312 31727312 PRJNA728642_P_NODE_15097_length_258_cov_0.875676_g14826_i0 PRJNA728642 15097 258 0.875676 2.25924408 Salix brachista 2182728 Plants Plants 152 7.31e-44   NR KAB5569525.1 2182728 g14826 i0 95.2 3.86046511627907 83 4 96.5 0 8 256 143 225 KAB5569525.1 hypothetical protein DKX38_003318 [Salix brachista] diamond 996 152 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix brachista
31917227 31917227 PRJNA728642_P_NODE_16237_length_250_cov_0.870056_g15966_i0 PRJNA728642 16237 250 0.870056 2.17514 Sphagnum balticum 128184 Plants Plants 134 2.61e-38   NR CAM6001409.1 128184 g15966 i0 77.8 0.972 81 18 97.2 0 248 6 50 130 CAM6001409.1 unnamed protein product [Sphagnum balticum] diamond 243 134 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
32212395 32212395 PRJNA728642_P_NODE_9258_length_334_cov_2.195402_g8987_i0 PRJNA728642 9258 334 2.195402 7.33264268 Salix 40685 Plants Plants 165 1.13e-47   NR KAG5244762.1 1278906 g8987 i0 89.8 5.2814371257485 98 3 88 1 39 332 1 91 KAG5244762.1 invertase inhibitor [Salix suchowensis] diamond 1764 165 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix suchowensis
32233917 32233917 PRJNA728642_P_NODE_13618_length_273_cov_1.150000_g13347_i0 PRJNA728642 13618 273 1.15 3.1395 Parasponia andersonii 3476 Plants Plants 144 6.6e-39   NR PON39210.1 3476 g13347 i0 73.6 2 91 23 100 1 1 273 59 148 PON39210.1 Aspartic peptidase [Parasponia andersonii] diamond 546 144 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Parasponia Parasponia andersonii
32518690 32518690 PRJNA728642_P_NODE_6659_length_397_cov_1.324074_g6388_i0 PRJNA728642 6659 397 1.324074 5.25657378 Parasponia andersonii 3476 Plants Plants 83.2 3.97e-18   NR PON40070.1 3476 g6388 i0 52.8 0.544080604534005 72 32 53.7 2 105 317 4 74 PON40070.1 hypothetical protein PanWU01x14_300130 [Parasponia andersonii] diamond 216 83.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Parasponia Parasponia andersonii
32613079 32613079 PRJNA728642_P_NODE_16240_length_250_cov_0.870056_g15969_i0 PRJNA728642 16240 250 0.870056 2.17514 Citrus x changshan-huyou 2935761 Plants Plants 117 2.46e-31   NR KAK9181630.1 2935761 g15969 i0 93.8 0.78 65 4 78 0 196 2 60 124 KAK9181630.1 hypothetical protein WN944_024768 [Citrus x changshan-huyou] diamond 195 117 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus x changshan-huyou
32613082 32613082 PRJNA728642_P_NODE_8680_length_345_cov_2.264706_g8409_i0 PRJNA728642 8680 345 2.264706 7.8132357 Salix viminalis 40686 Plants Plants 223 5.04e-71   NR KAJ6696764.1 40686 g8409 i0 93.8 1.94782608695652 112 7 97.4 0 344 9 166 277 KAJ6696764.1 hypothetical protein OIU85_003145 [Salix viminalis] diamond 672 223 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix viminalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;