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contig_metadata

14 rows where analysis = "diamond" and bioproject = "PRJNA727760"

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tax_kingdom 3

tax_superkingdom 2

tax_clade 1

bioproject 1

  • PRJNA727760 · 14 ✖

analysis 1

  • diamond · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4541063 4541063 PRJNA727760_S_NODE_1704_length_351_cov_1.687050_g1676_i0 PRJNA727760 1704 351 1.68705 5.9215455 Porphyrobacter sp. GA68 2883480 Bacteria Bacteria 96.7 1.18e-20   NR WP_228244238.1 2883480 g1676 i0 96.2 0.452991452991453 53 2 45.3 0 44 202 5 57 WP_228244238.1 alpha/beta fold hydrolase [Porphyrobacter sp. GA68] diamond 159 96.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Porphyrobacter Porphyrobacter sp. GA68
27716103 27716103 PRJNA727760_S_NODE_2544_length_285_cov_1.561321_g2516_i0 PRJNA727760 2544 285 1.561321 4.44976485 Malassezia restricta CBS 7877 425264 Fungi Fungi 118 6.229999999999999e-31   NR AYO44820.1 425264 g2516 i0 71.1 0.947368421052632 90 26 94.7 0 283 14 61 150 AYO44820.1 heat shock protein GrpE [Malassezia restricta CBS 7877] diamond 270 118 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
28104746 28104746 PRJNA727760_S_NODE_2505_length_288_cov_0.934884_g2477_i0 PRJNA727760 2505 288 0.934884 2.69246592 Microbotryomycetes 162481 Fungi Fungi 60.5 6.06e-9   NR GAA5898551.1 183962 g2477 i0 75.5 2.86458333333333 49 4 44.8 3 286 158 110 156 GAA5898551.1 hypothetical protein JCM6883_003349 [Sporobolomyces salmoneus] diamond 825 60.8 0.995065789473684 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces salmoneus
28189059 28189059 PRJNA727760_S_NODE_3246_length_256_cov_1.704918_g3218_i0 PRJNA727760 3246 256 1.704918 4.36459008 Eolophus roseicapilla 176039 Chordata Chordata 55.5 1.36e-6   NR NXD65386.1 176039 g3218 i0 52.5 0.71484375 61 29 71.5 0 254 72 288 348 NXD65386.1 IDHP dehydrogenase [Eolophus roseicapilla] diamond 183 55.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Psittaciformes Cacatuidae Eolophus Eolophus roseicapilla
29052270 29052270 PRJNA727760_S_NODE_1428_length_385_cov_6.169872_g1400_i0 PRJNA727760 1428 385 6.169872 23.7540072 root 1 Root_unresolved Root_unresolved 53.1 4.16e-5   NR GBN61280.1 182803 g1400 i0 50.9 3.8025974025974 53 26 41.3 0 269 111 1136 1188 GBN61280.1 putative RNA-directed DNA polymerase from transposon X-element [Araneus ventricosus] diamond 1464 53.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Araneidae Araneus Araneus ventricosus
29262618 29262618 PRJNA727760_S_NODE_2669_length_279_cov_1.893204_g2641_i0 PRJNA727760 2669 279 1.893204 5.28203916 Sarocladium strictum 5046 Fungi Fungi 58.9 1.08e-7   NR KAL2213322.1 5046 g2641 i0 47.8 0.741935483870968 69 25 67.7 2 12 200 325 388 KAL2213322.1 concanavalin A-like lectin/glucanase [Sarocladium strictum] diamond 207 58.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium strictum
29714814 29714814 PRJNA727760_S_NODE_3610_length_246_cov_1.381503_g3582_i0 PRJNA727760 3610 246 1.381503 3.39849738 synthetic construct 32630 Root_unresolved Root_unresolved 90.1 7.59e-19   NR QPD90060.1 32630 g3582 i0 72.6 11.5243902439024 62 17 75.6 0 1 186 186 247 QPD90060.1 G-GESS [synthetic construct] diamond 2835 90.1 1                 synthetic construct
29767924 29767924 PRJNA727760_S_NODE_2491_length_288_cov_1.813953_g2463_i0 PRJNA727760 2491 288 1.813953 5.22418464 Knufia fluminis 191047 Fungi Fungi 80.1 7.77e-17   NR KAK5953335.1 191047 g2463 i0 62.8 0.8125 78 21 72.9 1 287 78 53 130 KAK5953335.1 hypothetical protein OHC33_005903 [Knufia fluminis] diamond 234 80.1 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Knufia Knufia fluminis
29926095 29926095 PRJNA727760_S_NODE_1631_length_361_cov_1.083333_g1603_i0 PRJNA727760 1631 361 1.083333 3.91083213 Purpureocillium lilacinum 33203 Fungi Fungi 68.9 9.7e-11   NR XP_018181215.1 33203 g1603 i0 89.1 0.914127423822715 55 6 45.7 0 361 197 813 867 XP_018181215.1 translation initiation factor 3 subunit c [Purpureocillium lilacinum] diamond 330 68.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Ophiocordycipitaceae Purpureocillium Purpureocillium lilacinum
30431873 30431873 PRJNA727760_S_NODE_1193_length_429_cov_1.558989_g1165_i0 PRJNA727760 1193 429 1.558989 6.68806281 Sarocladium strictum 5046 Fungi Fungi 137 6.74e-39   NR KAK0385092.1 5046 g1165 i0 95.3 0.741258741258741 106 2 72 1 429 121 17 122 KAK0385092.1 hypothetical protein NLU13_7570 [Sarocladium strictum] diamond 318 137 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium strictum
31157796 31157796 PRJNA727760_S_NODE_3375_length_252_cov_1.284916_g3347_i0 PRJNA727760 3375 252 1.284916 3.23798832 Talaromyces marneffei 37727 Fungi Fungi 57 1.65e-8   NR XP_054121538.1 37727 g3347 i0 46.4 0.821428571428571 69 34 82.1 1 252 46 8 73 XP_054121538.1 uncharacterized protein EYB26_006287 [Talaromyces marneffei] diamond 207 57 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae Talaromyces Talaromyces marneffei
31664041 31664041 PRJNA727760_S_NODE_3637_length_246_cov_0.901734_g3609_i0 PRJNA727760 3637 246 0.901734 2.21826564 Malassezia psittaci 1821823 Fungi Fungi 60.5 7.19e-9   NR WFD42247.1 1821823 g3609 i0 43 0.963414634146341 79 32 80.5 2 5 202 119 197 WFD42247.1 hypothetical protein MPSI1_000888 [Malassezia psittaci] diamond 237 60.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia psittaci
31822168 31822168 PRJNA727760_S_NODE_2557_length_284_cov_3.322275_g2529_i0 PRJNA727760 2557 284 3.322275 9.435261 Sarocladium strictum 5046 Fungi Fungi 92 3.8e-21   NR KAK0386860.1 5046 g2529 i0 86.4 0.623239436619718 59 8 62.3 0 280 104 107 165 KAK0386860.1 hypothetical protein NLU13_5173 [Sarocladium strictum] diamond 177 92 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium strictum
32297313 32297313 PRJNA727760_S_NODE_1659_length_357_cov_4.971831_g1631_i0 PRJNA727760 1659 357 4.971831 17.74943667 Pseudomonas syringae group genomosp. 7 251699 Bacteria Bacteria 43.9 0.0117   NR WP_395587240.1 251699 g1631 i0 48.7 0.65546218487395 78 22 58.8 8 115 324 4 71 WP_395587240.1 hypothetical protein [Pseudomonas syringae group genomosp. 7] diamond 234 43.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae group genomosp. 7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;