RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA725806" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA725806 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32581772 32581772 PRJNA725806_P_NODE_92199_length_203_cov_3.385542_g91897_i0 PRJNA725806 92199 203 3.385542 6.87265026 Candidatus Nanopusillus acidilobi 1577684 Archaea Archaea 42.7 0.0225   NR MFP3257280.1 1577684 g91897 i0 41 0.576354679802956 39 23 57.6 0 137 21 458 496 MFP3257280.1 bifunctional DNA primase/polymerase [Candidatus Nanopusillus acidilobi] diamond 117 42.7 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia Nanoarchaeales Nanopusillaceae Candidatus Nanopusillus Candidatus Nanopusillus acidilobi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;