contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA725806" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21596744 | 21596744 | PRJNA725806_P_NODE_96437_length_200_cov_1.650307_g96135_i0 | PRJNA725806 | 96437 | 200 | 1.650307 | 3.300614 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 114 | 1.71e-27 | NR | MBI4818445.1 | 2026735 | g96135 | i0 | 90 | 1.8 | 60 | 6 | 90 | 0 | 20 | 199 | 149 | 208 | MBI4818445.1 serine/threonine protein kinase [Deltaproteobacteria bacterium] | diamond | 360 | 114 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27020663 | 27020663 | PRJNA725806_P_NODE_39242_length_266_cov_14.532751_g38945_i0 | PRJNA725806 | 39242 | 266 | 14.532751 | 38.65711766 | Stigmatella ashevillena | 2995309 | Bacteria | Bacteria | 100 | 9.08e-23 | NR | WP_272137391.1 | 2995309 | g38945 | i0 | 55.2 | 1.90601503759399 | 87 | 39 | 98.1 | 0 | 263 | 3 | 17 | 103 | WP_272137391.1 glycoside hydrolase family 76 protein [Stigmatella ashevillena] | diamond | 507 | 100 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella ashevillensis | ||
| 27336852 | 27336852 | PRJNA725806_P_NODE_120363_length_184_cov_2.326531_g120061_i0 | PRJNA725806 | 120363 | 184 | 2.326531 | 4.28081704 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 41.6 | 0.0421 | NR | MCA9509348.1 | 2026763 | g120061 | i0 | 39.5 | 0.701086956521739 | 43 | 26 | 70.1 | 0 | 140 | 12 | 286 | 328 | MCA9509348.1 methyltransferase domain-containing protein [Myxococcales bacterium] | diamond | 129 | 41.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 27536619 | 27536619 | PRJNA725806_P_NODE_85923_length_208_cov_4.485380_g85622_i0 | PRJNA725806 | 85923 | 208 | 4.48538 | 9.3295904 | Myxococcales | 29 | Bacteria | Bacteria | 61.2 | 4.43e-9 | NR | WP_269744501.1 | 41 | g85622 | i0 | 58.5 | 4.09615384615385 | 41 | 16 | 59.1 | 1 | 21 | 143 | 225 | 264 | WP_269744501.1 glycoside hydrolase family 76 protein [Stigmatella aurantiaca] | diamond | 852 | 61.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 27936822 | 27936822 | PRJNA725806_P_NODE_64125_length_230_cov_1.901554_g63827_i0 | PRJNA725806 | 64125 | 230 | 1.901554 | 4.3735742 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 144 | 4.06e-39 | NR | MBL8632630.1 | 2026763 | g63827 | i0 | 95.8 | 0.939130434782609 | 72 | 3 | 93.9 | 0 | 2 | 217 | 90 | 161 | MBL8632630.1 DUF1552 domain-containing protein [Myxococcales bacterium] | diamond | 216 | 144 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28631525 | 28631525 | PRJNA725806_P_NODE_119447_length_184_cov_7.496599_g119145_i0 | PRJNA725806 | 119447 | 184 | 7.496599 | 13.79374216 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 48.5 | 1.48e-4 | NR | UCH22103.1 | 2026735 | g119145 | i0 | 51.4 | 0.570652173913043 | 35 | 17 | 57.1 | 0 | 119 | 15 | 118 | 152 | UCH22103.1 MAG: long-chain fatty acid--CoA ligase, partial [Deltaproteobacteria bacterium] | diamond | 105 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28757544 | 28757544 | PRJNA725806_P_NODE_58787_length_236_cov_6.165829_g58490_i0 | PRJNA725806 | 58787 | 236 | 6.165829 | 14.55135644 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 42.7 | 0.033 | NR | HUS28617.1 | 2212474 | g58490 | i0 | 33.8 | 0.826271186440678 | 65 | 37 | 75 | 2 | 189 | 13 | 10 | 74 | HUS28617.1 VOC family protein [Kofleriaceae bacterium] | diamond | 195 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 29105100 | 29105100 | PRJNA725806_P_NODE_184328_length_154_cov_2.888889_g184026_i0 | PRJNA725806 | 184328 | 154 | 2.888889 | 4.44888906 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 74.3 | 8.09e-14 | NR | MBX3226573.1 | 1971228 | g184026 | i0 | 73.6 | 1.03246753246753 | 53 | 12 | 99.4 | 1 | 1 | 153 | 506 | 558 | MBX3226573.1 ATP-dependent RNA helicase HrpA [Labilithrix sp.] | diamond | 159 | 74.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 29609798 | 29609798 | PRJNA725806_P_NODE_93050_length_202_cov_6.721212_g92748_i0 | PRJNA725806 | 93050 | 202 | 6.721212 | 13.57684824 | Aggregicoccus sp. | 1872414 | Bacteria | Bacteria | 42 | 0.039 | NR | HET9449593.1 | 1872414 | g92748 | i0 | 41.4 | 0.861386138613861 | 58 | 28 | 77.2 | 1 | 179 | 24 | 302 | 359 | HET9449593.1 HupE/UreJ family protein [Aggregicoccus sp.] | diamond | 174 | 42 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Aggregicoccus | Aggregicoccus sp. | ||
| 32864910 | 32864910 | PRJNA725806_P_NODE_177180_length_157_cov_1.625000_g176878_i0 | PRJNA725806 | 177180 | 157 | 1.625 | 2.55125 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 73.2 | 2e-13 | NR | HEX4405947.1 | 3058050 | g176878 | i0 | 71.4 | 2.65605095541401 | 49 | 14 | 93.6 | 0 | 147 | 1 | 72 | 120 | HEX4405947.1 hypothetical protein [Polyangia bacterium] | diamond | 417 | 73.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;