RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA724039" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724039 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4539628 4539628 PRJNA724039_S_NODE_6644_length_264_cov_2.977974_g6437_i0 PRJNA724039 6644 264 2.977974 7.86185136 Dioszegia hungarica 4972 Fungi Fungi 72 6.49e-14   NR XP_052945900.1 4972 g6437 i0 78 2.79545454545455 41 9 46.6 0 263 141 71 111 XP_052945900.1 60S ribosomal protein L36 [Dioszegia hungarica] diamond 738 72 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
13464893 13464893 PRJNA724039_S_NODE_15691_length_161_cov_1.629032_g15484_i0 PRJNA724039 15691 161 1.629032 2.62274152 Wolfiporia cocos MD-1 81056 Fungi Fungi 80.5 8.15e-18   NR PCH33518.1 742152 g15484 i0 75.5 1.99378881987578 53 13 98.8 0 159 1 28 80 PCH33518.1 ribosomal protein L22e [Wolfiporia cocos MD-104 SS10] diamond 321 80.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phaeolaceae Wolfiporia Wolfiporia cocos
28578556 28578556 PRJNA724039_S_NODE_16467_length_157_cov_1.691667_g16260_i0 PRJNA724039 16467 157 1.691667 2.65591719 Agaricales 5338 Fungi Fungi 57.4 6.2e-9   NR KAL0949195.1 104357 g16260 i0 52.2 12.6114649681529 46 22 87.9 0 156 19 57 102 KAL0949195.1 hypothetical protein HGRIS_009273 [Hohenbuehelia grisea] diamond 1980 57.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pleurotaceae Hohenbuehelia Hohenbuehelia grisea
29367914 29367914 PRJNA724039_S_NODE_7809_length_238_cov_2.019900_g7602_i0 PRJNA724039 7809 238 2.0199 4.807362 Basidiomycota 5204 Fungi Fungi 73.2 6.6e-13   NR QCI56435.1 39966 g7602 i0 66 3.15126050420168 50 17 63 0 1 150 428 477 QCI56435.1 cytochrome c oxidase subunit 1 [Hypsizygus marmoreus] diamond 750 73.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Lyophyllaceae Hypsizygus Hypsizygus marmoreus
29578257 29578257 PRJNA724039_S_NODE_14470_length_168_cov_1.106870_g14263_i0 PRJNA724039 14470 168 1.10687 1.8595416 Malassezia caprae 1381934 Fungi Fungi 75.5 3.79e-14   NR WFD19044.1 1381934 g14263 i0 55.6 5.78571428571429 54 24 96.4 0 2 163 1056 1109 WFD19044.1 protein kinase C [Malassezia caprae] diamond 972 75.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia caprae
31727220 31727220 PRJNA724039_S_NODE_13097_length_177_cov_1.464286_g12890_i0 PRJNA724039 13097 177 1.464286 2.59178622 Rhodotorula diobovata 5288 Fungi Fungi 68.6 7.2e-12   NR TNY21956.1 5288 g12890 i0 67.9 7.79661016949153 56 18 94.9 0 4 171 229 284 TNY21956.1 ribosomal protein L10-domain-containing protein, partial [Rhodotorula diobovata] diamond 1380 68.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula diobovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;