RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA724039" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA724039 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27178482 27178482 PRJNA724039_S_NODE_5182_length_307_cov_4.477778_g4975_i0 PRJNA724039 5182 307 4.477778 13.74677846 Inoviridae sp. 2219103 Viruses Viruses 57.4 1.02e-7   NR XOE96095.1 2219103 g4975 i0 55.6 0.703583061889251 36 16 35.2 0 254 147 104 139 XOE96095.1 MAG: hypothetical protein [Inoviridae sp.] diamond 216 57.4 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
27305208 27305208 PRJNA724039_S_NODE_15563_length_162_cov_1.160000_g15356_i0 PRJNA724039 15563 162 1.16 1.8792 Inoviridae sp. 2219103 Viruses Viruses 78.2 3.13e-15   NR XOE96178.1 2219103 g15356 i0 70.8 1.81481481481481 48 14 88.9 0 161 18 342 389 XOE96178.1 MAG: Zot-like toxin [Inoviridae sp.] diamond 294 78.2 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
28062871 28062871 PRJNA724039_S_NODE_10105_length_204_cov_4.922156_g9898_i0 PRJNA724039 10105 204 4.922156 10.04119824 Inoviridae sp. 2219103 Viruses Viruses 56.6 4.84e-8   NR XOF04344.1 2219103 g9898 i0 50 0.941176470588235 64 30 94.1 1 196 5 26 87 XOF04344.1 MAG: hypothetical protein [Inoviridae sp.] diamond 192 56.6 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;