contig_metadata
16 rows where analysis = "diamond", bioproject = "PRJNA724039" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24937651 | 24937651 | PRJNA724039_S_NODE_17760_length_151_cov_4.008772_g17553_i0 | PRJNA724039 | 17760 | 151 | 4.008772 | 6.05324572 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 70.9 | 7.2e-13 | NR | HEY8286704.1 | 2026724 | g17553 | i0 | 67.3 | 2.9205298013245 | 49 | 14 | 93.4 | 1 | 149 | 9 | 71 | 119 | HEY8286704.1 methyltransferase domain-containing protein [Chloroflexota bacterium] | diamond | 441 | 70.9 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 26873030 | 26873030 | PRJNA724039_S_NODE_10821_length_196_cov_2.924528_g10614_i0 | PRJNA724039 | 10821 | 196 | 2.924528 | 5.73207488 | Bacteria | 2 | Bacteria | Bacteria | 65.1 | 2.23e-10 | NR | WP_259617642.1 | 1229154 | g10614 | i0 | 46.2 | 4.83673469387755 | 65 | 35 | 99.5 | 0 | 1 | 195 | 70 | 134 | WP_259617642.1 biotin-dependent carboxyltransferase family protein [Paenibacillus doosanensis] | diamond | 948 | 65.5 | 0.993893129770992 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus doosanensis | ||
| 27473400 | 27473400 | PRJNA724039_S_NODE_4823_length_320_cov_2.353357_g4616_i0 | PRJNA724039 | 4823 | 320 | 2.353357 | 7.5307424 | Bacteria | 2 | Bacteria | Bacteria | 79 | 2.02e-15 | NR | WP_115856743.1 | 46127 | g4616 | i0 | 45.9 | 2.11875 | 74 | 40 | 69.4 | 0 | 319 | 98 | 138 | 211 | WP_115856743.1 pyroglutamyl-peptidase I [Staphylococcus felis] | diamond | 678 | 79 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus felis | ||
| 27684428 | 27684428 | PRJNA724039_S_NODE_13844_length_172_cov_1.429630_g13637_i0 | PRJNA724039 | 13844 | 172 | 1.42963 | 2.4589636 | Nostoc linckia z16 | 1628751 | Bacteria | Bacteria | 115 | 1.8499999999999999e-28 | NR | PHK27803.1 | 1628751 | g13637 | i0 | 100 | 0.976744186046512 | 56 | 0 | 97.7 | 0 | 3 | 170 | 123 | 178 | PHK27803.1 hypothetical protein VF13_41225 [Nostoc linckia z16] | diamond | 168 | 115 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc linckia | |
| 27883810 | 27883810 | PRJNA724039_S_NODE_8985_length_218_cov_4.408840_g8778_i0 | PRJNA724039 | 8985 | 218 | 4.40884 | 9.6112712 | Bacteria | 2 | Bacteria | Bacteria | 99 | 4.21e-25 | NR | MFK5281896.1 | 1597 | g8778 | i0 | 63.5 | 2.82110091743119 | 63 | 23 | 86.7 | 0 | 30 | 218 | 3 | 65 | MFK5281896.1 hypothetical protein [Lacticaseibacillus paracasei] | diamond | 615 | 100 | 0.99 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Lacticaseibacillus paracasei | ||
| 28000021 | 28000021 | PRJNA724039_S_NODE_8345_length_229_cov_2.416667_g8138_i0 | PRJNA724039 | 8345 | 229 | 2.416667 | 5.53416743 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 55.5 | 5.54e-7 | NR | HYF82516.1 | 2044939 | g8138 | i0 | 57.5 | 1.02183406113537 | 40 | 17 | 52.4 | 0 | 108 | 227 | 15 | 54 | HYF82516.1 HutD family protein [Clostridia bacterium] | diamond | 234 | 55.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 28010373 | 28010373 | PRJNA724039_S_NODE_9565_length_211_cov_1.327586_g9358_i0 | PRJNA724039 | 9565 | 211 | 1.327586 | 2.80120646 | Actinomycetes | 1760 | Bacteria | Bacteria | 73.6 | 3.33e-13 | NR | WP_091076155.1 | 546874 | g9358 | i0 | 51.4 | 5.74407582938389 | 70 | 34 | 99.5 | 0 | 1 | 210 | 187 | 256 | WP_091076155.1 NAD-dependent succinate-semialdehyde dehydrogenase [Microlunatus sagamiharensis] | diamond | 1212 | 74.3 | 0.990578734858681 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Microlunatus | Microlunatus sagamiharensis | ||
| 28347094 | 28347094 | PRJNA724039_S_NODE_7046_length_254_cov_2.096774_g6839_i0 | PRJNA724039 | 7046 | 254 | 2.096774 | 5.32580596 | Candidatus Obscuribacterales bacterium | 2364082 | Bacteria | Bacteria | 129 | 3.61e-37 | NR | MFA6208533.1 | 2364082 | g6839 | i0 | 95.7 | 0.826771653543307 | 70 | 3 | 82.7 | 0 | 43 | 252 | 1 | 70 | MFA6208533.1 hypothetical protein [Candidatus Obscuribacterales bacterium] | diamond | 210 | 129 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Melainabacteria | Candidatus Obscuribacterales | Candidatus Obscuribacterales bacterium | ||||
| 28978740 | 28978740 | PRJNA724039_S_NODE_9008_length_218_cov_1.917127_g8801_i0 | PRJNA724039 | 9008 | 218 | 1.917127 | 4.17933686 | Nostoc linckia z16 | 1628751 | Bacteria | Bacteria | 142 | 3.87e-38 | NR | PHK27803.1 | 1628751 | g8801 | i0 | 98.6 | 0.990825688073395 | 72 | 1 | 99.1 | 0 | 1 | 216 | 172 | 243 | PHK27803.1 hypothetical protein VF13_41225 [Nostoc linckia z16] | diamond | 216 | 142 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc linckia | |
| 29136723 | 29136723 | PRJNA724039_S_NODE_15849_length_160_cov_2.186992_g15642_i0 | PRJNA724039 | 15849 | 160 | 2.186992 | 3.4991872 | Nostoc linckia z16 | 1628751 | Bacteria | Bacteria | 102 | 6.3e-24 | NR | PHK27803.1 | 1628751 | g15642 | i0 | 100 | 0.975 | 52 | 0 | 97.5 | 0 | 3 | 158 | 302 | 353 | PHK27803.1 hypothetical protein VF13_41225 [Nostoc linckia z16] | diamond | 156 | 102 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc linckia | |
| 29294330 | 29294330 | PRJNA724039_S_NODE_14849_length_165_cov_4.453125_g14642_i0 | PRJNA724039 | 14849 | 165 | 4.453125 | 7.34765625 | Corynebacterium ammoniagenes | 1697 | Bacteria | Bacteria | 41.2 | 0.0106 | NR | GJN44007.1 | 1697 | g14642 | i0 | 63.3 | 0.545454545454545 | 30 | 10 | 54.5 | 1 | 5 | 94 | 37 | 65 | GJN44007.1 hypothetical protein CAT723_24860 [Corynebacterium ammoniagenes] | diamond | 90 | 41.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium ammoniagenes | ||
| 29451872 | 29451872 | PRJNA724039_S_NODE_11510_length_190_cov_1.470588_g11303_i0 | PRJNA724039 | 11510 | 190 | 1.470588 | 2.7941172 | Candidatus Chloroploca asiatica | 1506545 | Bacteria | Bacteria | 44.3 | 0.00538 | NR | WP_172451194.1 | 1506545 | g11303 | i0 | 46.8 | 0.742105263157895 | 47 | 25 | 74.2 | 0 | 141 | 1 | 596 | 642 | WP_172451194.1 diguanylate cyclase [Candidatus Chloroploca asiatica] | diamond | 141 | 44.3 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Oscillochloridaceae | Candidatus Chloroploca | Candidatus Chloroploca asiatica | ||
| 29641312 | 29641312 | PRJNA724039_S_NODE_16910_length_155_cov_1.915254_g16703_i0 | PRJNA724039 | 16910 | 155 | 1.915254 | 2.9686437 | Ktedonobacterales bacterium | 2306968 | Bacteria | Bacteria | 57.8 | 5.52e-8 | NR | HEX8997723.1 | 2306968 | g16703 | i0 | 55.1 | 0.948387096774194 | 49 | 21 | 94.8 | 1 | 8 | 154 | 364 | 411 | HEX8997723.1 NADH-quinone oxidoreductase subunit N [Ktedonobacterales bacterium] | diamond | 147 | 57.8 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Ktedonobacterales bacterium | ||||
| 30305458 | 30305458 | PRJNA724039_S_NODE_12452_length_182_cov_1.586207_g12245_i0 | PRJNA724039 | 12452 | 182 | 1.586207 | 2.88689674 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 42.4 | 0.0233 | NR | MCB9436685.1 | 2073117 | g12245 | i0 | 41.9 | 1.02197802197802 | 62 | 31 | 95.6 | 2 | 177 | 4 | 154 | 214 | MCB9436685.1 DUF11 domain-containing protein [Anaerolineales bacterium] | diamond | 186 | 42.4 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 30557529 | 30557529 | PRJNA724039_S_NODE_15553_length_162_cov_1.224000_g15346_i0 | PRJNA724039 | 15553 | 162 | 1.224 | 1.98288 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 47 | 1.18e-4 | NR | MCW5848612.1 | 2052143 | g15346 | i0 | 47.2 | 0.981481481481482 | 53 | 28 | 98.1 | 0 | 159 | 1 | 66 | 118 | MCW5848612.1 profilin [Anaerolineae bacterium] | diamond | 159 | 47 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 31853773 | 31853773 | PRJNA724039_S_NODE_17317_length_153_cov_2.982759_g17110_i0 | PRJNA724039 | 17317 | 153 | 2.982759 | 4.56362127 | uncultured Anaerotignum sp. | 2039243 | Bacteria | Bacteria | 50.8 | 1.55e-5 | NR | WP_294680500.1 | 2039243 | g17110 | i0 | 56.1 | 0.803921568627451 | 41 | 18 | 80.4 | 0 | 135 | 13 | 419 | 459 | WP_294680500.1 tetratricopeptide repeat protein [uncultured Anaerotignum sp.] | diamond | 123 | 50.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Anaerotignaceae | Anaerotignum | uncultured Anaerotignum sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;