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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA724039" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 31 ✖

bioproject 1

  • PRJNA724039 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
711016 711016 PRJNA724039_S_NODE_10721_length_197_cov_3.043750_g10514_i0 PRJNA724039 10721 197 3.04375 5.9961875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 1.92e-35   NR CEP00957.1 37360 g10514 i0 88.7 5.6497461928934 62 7 94.4 0 196 11 20 81 CEP00957.1 hypothetical protein PBRA_008269 [Plasmodiophora brassicae] diamond 1113 125 0.992 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
711062 711062 PRJNA724039_S_NODE_13921_length_171_cov_2.768657_g13714_i0 PRJNA724039 13921 171 2.768657 4.73440347 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.06e-15   NR CEO96095.1 37360 g13714 i0 62.5 0.982456140350877 56 21 98.2 0 2 169 92 147 CEO96095.1 hypothetical protein PBRA_004785 [Plasmodiophora brassicae] diamond 168 78.6 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
711103 711103 PRJNA724039_S_NODE_16761_length_156_cov_1.134454_g16554_i0 PRJNA724039 16761 156 1.134454 1.76974824 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 68.6 3.26e-12   NR EJK47098.1 159749 g16554 i0 58.8 7.78846153846154 51 21 98.1 0 2 154 81 131 EJK47098.1 hypothetical protein THAOC_34210 [Thalassiosira oceanica] diamond 1215 68.9 0.995645863570392 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
2469454 2469454 PRJNA724039_S_NODE_1382_length_690_cov_5.545176_g1215_i0 PRJNA724039 1382 690 5.545176 38.2617144 Cercozoa sp. DMV 1342330 SAR_Eukaryotes SAR_Eukaryotes 355 1.7199999999999995e-118   NR BAN37425.1 1342330 g1215 i0 73.7 2.92173913043478 224 59 97.4 0 1 672 204 427 BAN37425.1 elongation factor 1-alpha [Cercozoa sp. DMV] diamond 2016 355 1 Eukaryota Sar   Cercozoa         Cercozoa sp. DMV
7089835 7089835 PRJNA724039_S_NODE_14146_length_170_cov_1.428571_g13939_i0 PRJNA724039 14146 170 1.428571 2.4285707 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 92 7.240000000000001e-21   NR CEM02491.1 1169540 g13939 i0 75 1.95882352941176 56 14 98.8 0 1 168 71 126 CEM02491.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 333 92 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
7571983 7571983 PRJNA724039_S_NODE_15826_length_160_cov_2.918699_g15619_i0 PRJNA724039 15826 160 2.918699 4.6699184 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 80.9 1.25e-16   NR CEO96095.1 37360 g15619 i0 68.6 0.95625 51 16 95.6 0 153 1 145 195 CEO96095.1 hypothetical protein PBRA_004785 [Plasmodiophora brassicae] diamond 153 80.9 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
14740082 14740082 PRJNA724039_S_NODE_10272_length_202_cov_3.472727_g10065_i0 PRJNA724039 10272 202 3.472727 7.01490854 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 1.97e-26   NR DBA04875.1 4803 g10065 i0 71.2 8.82178217821782 66 19 98 0 198 1 17 82 DBA04875.1 TPA: hypothetical protein N0F65_006877 [Lagenidium giganteum] diamond 1782 102 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
18562876 18562876 PRJNA724039_S_NODE_16875_length_155_cov_2.398305_g16668_i0 PRJNA724039 16875 155 2.398305 3.71737275 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.01e-15   NR KAF4686433.1 32597 g16668 i0 78 4.85806451612903 50 11 96.8 0 3 152 109 158 KAF4686433.1 40S ribosomal protein S6 [Perkinsus olseni] diamond 753 79.3 0.991172761664565 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27030916 27030916 PRJNA724039_S_NODE_13762_length_172_cov_2.888889_g13555_i0 PRJNA724039 13762 172 2.888889 4.96888908 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 79.3 1.82e-15   NR EWM30281.1 72520 g13555 i0 71.4 3.41860465116279 49 14 85.5 0 172 26 825 873 EWM30281.1 elongation factor 2 [Nannochloropsis gaditana] diamond 588 79.3 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis gaditana
27347220 27347220 PRJNA724039_S_NODE_12703_length_180_cov_2.027972_g12496_i0 PRJNA724039 12703 180 2.027972 3.6503496 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 97.8 1.87e-22   NR 6V6A_A 383379 g12496 i0 79.3 13.5333333333333 58 12 96.7 0 176 3 54 111 6V6A_A Chain A, Mitogen-activated protein kinase [Toxoplasma gondii RH] diamond 2436 97.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
27473398 27473398 PRJNA724039_S_NODE_14943_length_165_cov_1.781250_g14736_i0 PRJNA724039 14943 165 1.78125 2.9390625 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 91.7 6.55e-22   NR CEO99151.1 37360 g14736 i0 79.6 47.1272727272727 54 11 98.2 0 2 163 91 144 CEO99151.1 hypothetical protein PBRA_001056 [Plasmodiophora brassicae] diamond 7776 92.4 0.992424242424242 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27589478 27589478 PRJNA724039_S_NODE_12744_length_180_cov_1.398601_g12537_i0 PRJNA724039 12744 180 1.398601 2.5174818 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 52.4 5.46e-6   NR KAF4657565.1 32597 g12537 i0 66.7 3.85 33 11 55 0 101 3 100 132 KAF4657565.1 60S ribosomal protein L12, partial [Perkinsus olseni] diamond 693 52.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27621035 27621035 PRJNA724039_S_NODE_3464_length_390_cov_2.371105_g3257_i0 PRJNA724039 3464 390 2.371105 9.2473095 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 118 4.35e-31   NR ADK47156.1 323453 g3257 i0 100 0.438461538461538 57 0 43.8 0 389 219 89 145 ADK47156.1 ribosomal protein S23a [Heteromita sp. PRA-74] diamond 171 118 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
27789208 27789208 PRJNA724039_S_NODE_5304_length_303_cov_1.500000_g5097_i0 PRJNA724039 5304 303 1.5 4.545 Symbiodiniaceae 252141 SAR_Eukaryotes SAR_Eukaryotes 156 1.68e-44   NR OLP92270.1 2951 g5097 i0 72.3 20 101 28 100 0 303 1 157 257 OLP92270.1 60S ribosomal protein L13a [Symbiodinium microadriaticum] diamond 6060 157 0.993630573248408 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium microadriaticum
27904809 27904809 PRJNA724039_S_NODE_13385_length_175_cov_1.688406_g13178_i0 PRJNA724039 13385 175 1.688406 2.9547105 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 62.8 1.98e-10   NR CAD8127098.1 65129 g13178 i0 71.7 0.788571428571429 46 13 78.9 0 1 138 91 136 CAD8127098.1 unnamed protein product [Paramecium sonneborni] diamond 138 62.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
28126166 28126166 PRJNA724039_S_NODE_14825_length_166_cov_0.899225_g14618_i0 PRJNA724039 14825 166 0.899225 1.4927135 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 72.8 8.37e-14   NR TNV71297.1 5974 g14618 i0 63.6 0.993975903614458 55 20 99.4 0 166 2 158 212 TNV71297.1 hypothetical protein FGO68_gene13476 [Halteria grandinella] diamond 165 72.8 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
28126169 28126169 PRJNA724039_S_NODE_16545_length_157_cov_0.966667_g16338_i0 PRJNA724039 16545 157 0.966667 1.51766719 Cafeteria roenbergensis 33653 SAR_Eukaryotes SAR_Eukaryotes 74.7 1.84e-14   NR KAA0155508.1 33653 g16338 i0 69.2 1.98726114649682 52 16 99.4 0 157 2 76 127 KAA0155508.1 hypothetical protein FNF28_06710 [Cafeteria roenbergensis] diamond 312 74.7 1 Eukaryota Sar     Bigyra Bicosoecida Cafeteriaceae Cafeteria Cafeteria roenbergensis
28126173 28126173 PRJNA724039_S_NODE_6485_length_267_cov_2.804348_g6278_i0 PRJNA724039 6485 267 2.804348 7.48760916 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 109 1.4199999999999999e-25   NR CEL98422.1 1169540 g6278 i0 69.4 0.955056179775281 85 21 91 2 1 243 629 712 CEL98422.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 255 109 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
28578555 28578555 PRJNA724039_S_NODE_13707_length_173_cov_1.279412_g13500_i0 PRJNA724039 13707 173 1.279412 2.21338276 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.57e-5   NR XP_004035553.1 5932 g13500 i0 50 2.20231213872832 44 22 76.3 0 170 39 76 119 XP_004035553.1 hypothetical protein IMG5_097440 [Ichthyophthirius multifiliis] diamond 381 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29672910 29672910 PRJNA724039_S_NODE_16170_length_158_cov_3.487603_g15963_i0 PRJNA724039 16170 158 3.487603 5.51041274 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 90.5 1.8e-21   NR TYZ63444.1 1485010 g15963 i0 74.5 2.67721518987342 47 12 89.2 0 3 143 101 147 TYZ63444.1 hypothetical protein PybrP1_007303 [[Pythium] brassicae (nom. inval.)] diamond 423 90.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
29736118 29736118 PRJNA724039_S_NODE_17690_length_152_cov_1.260870_g17483_i0 PRJNA724039 17690 152 1.26087 1.9165224 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 75.9 7.19e-16   NR KRX10691.1 266149 g17483 i0 64 0.986842105263158 50 18 98.7 0 150 1 36 85 KRX10691.1 Translation protein SH3-like domain [Pseudocohnilembus persalinus] diamond 150 75.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30378926 30378926 PRJNA724039_S_NODE_15152_length_164_cov_1.598425_g14945_i0 PRJNA724039 15152 164 1.598425 2.621417 Cercozoa 136419 SAR_Eukaryotes SAR_Eukaryotes 83.6 9.13e-18   NR EWM20906.1 72520 g14945 i0 75.9 5.92682926829268 54 13 98.8 0 1 162 48 101 EWM20906.1 Ribosomal protein L7A/L8 [Nannochloropsis gaditana] diamond 972 84 0.995238095238095 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis gaditana
30431804 30431804 PRJNA724039_S_NODE_5733_length_289_cov_1.718254_g5526_i0 PRJNA724039 5733 289 1.718254 4.96575406 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 122 6.09e-33   NR GFH59293.1 426638 g5526 i0 61.1 3.9757785467128 95 34 98.6 1 289 5 15 106 GFH59293.1 RL9, ribosomal protein 9 [Chaetoceros tenuissimus] diamond 1149 122 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
30463384 30463384 PRJNA724039_S_NODE_17713_length_152_cov_1.069565_g17506_i0 PRJNA724039 17713 152 1.069565 1.6257388 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 73.2 1.99e-14   NR CDW79023.1 5949 g17506 i0 76 2.96052631578947 50 12 98.7 0 152 3 34 83 CDW79023.1 ribosomal protein 11a 60s large ribosomal subunit [Stylonychia lemnae] diamond 450 73.2 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31073708 31073708 PRJNA724039_S_NODE_15935_length_160_cov_1.178862_g15728_i0 PRJNA724039 15935 160 1.178862 1.8861792 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62 5.49e-10   NR KAI9917785.1 230839 g15728 i0 61.8 2.0625 55 18 97.5 2 5 160 17 71 KAI9917785.1 hypothetical protein PsorP6_012390 [Peronosclerospora sorghi] diamond 330 62.4 0.993589743589744 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
32275762 32275762 PRJNA724039_S_NODE_2098_length_529_cov_2.292683_g1902_i0 PRJNA724039 2098 529 2.292683 12.12829307 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 160 1.22e-45   NR KAH9082828.1 100861 g1902 i0 64.5 12.6238185255198 124 44 70.3 0 529 158 139 262 KAH9082828.1 hypothetical protein LEN26_021124 [Aphanomyces euteiches] diamond 6678 160 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
32360441 32360441 PRJNA724039_S_NODE_6659_length_264_cov_1.647577_g6452_i0 PRJNA724039 6659 264 1.647577 4.34960328 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.74e-17   NR KRX06453.1 266149 g6452 i0 50.6 0.875 77 38 87.5 0 1 231 89 165 KRX06453.1 Ribosomal protein L11, N-terminal [Pseudocohnilembus persalinus] diamond 231 82.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32518611 32518611 PRJNA724039_S_NODE_8399_length_228_cov_2.340314_g8192_i0 PRJNA724039 8399 228 2.340314 5.33591592 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 147 6.4e-44   NR ADK26622.1 323453 g8192 i0 93.3 0.986842105263158 75 5 98.7 0 226 2 46 120 ADK26622.1 rps22a [Heteromita sp. PRA-74] diamond 225 147 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
32560606 32560606 PRJNA724039_S_NODE_4339_length_340_cov_2.577558_g4132_i0 PRJNA724039 4339 340 2.577558 8.7636972 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 111 3.51e-28   NR DBA01302.1 4803 g4132 i0 53.5 8.82352941176471 101 41 84.7 2 340 53 83 182 DBA01302.1 TPA: hypothetical protein N0F65_001807 [Lagenidium giganteum] diamond 3000 112 0.991071428571429 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
32686149 32686149 PRJNA724039_S_NODE_14120_length_170_cov_1.736842_g13913_i0 PRJNA724039 14120 170 1.736842 2.9526314 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 93.6 4.1100000000000006e-21   NR CEP01219.1 37360 g13913 i0 69.6 70.1647058823529 56 17 98.8 0 3 170 7 62 CEP01219.1 hypothetical protein PBRA_001825 [Plasmodiophora brassicae] diamond 11928 94 0.995744680851064 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32875188 32875188 PRJNA724039_S_NODE_6100_length_278_cov_1.410788_g5893_i0 PRJNA724039 6100 278 1.410788 3.92199064 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 87.8 5.45e-20   NR CAD8057916.1 5886 g5893 i0 56.7 3.61510791366906 67 29 72.3 0 266 66 33 99 CAD8057916.1 unnamed protein product [Paramecium primaurelia] diamond 1005 87.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;