RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA724039" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA724039 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27684428 27684428 PRJNA724039_S_NODE_13844_length_172_cov_1.429630_g13637_i0 PRJNA724039 13844 172 1.42963 2.4589636 Nostoc linckia z16 1628751 Bacteria Bacteria 115 1.8499999999999999e-28   NR PHK27803.1 1628751 g13637 i0 100 0.976744186046512 56 0 97.7 0 3 170 123 178 PHK27803.1 hypothetical protein VF13_41225 [Nostoc linckia z16] diamond 168 115 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc linckia
28347094 28347094 PRJNA724039_S_NODE_7046_length_254_cov_2.096774_g6839_i0 PRJNA724039 7046 254 2.096774 5.32580596 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 129 3.61e-37   NR MFA6208533.1 2364082 g6839 i0 95.7 0.826771653543307 70 3 82.7 0 43 252 1 70 MFA6208533.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 210 129 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28978740 28978740 PRJNA724039_S_NODE_9008_length_218_cov_1.917127_g8801_i0 PRJNA724039 9008 218 1.917127 4.17933686 Nostoc linckia z16 1628751 Bacteria Bacteria 142 3.87e-38   NR PHK27803.1 1628751 g8801 i0 98.6 0.990825688073395 72 1 99.1 0 1 216 172 243 PHK27803.1 hypothetical protein VF13_41225 [Nostoc linckia z16] diamond 216 142 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc linckia
29136723 29136723 PRJNA724039_S_NODE_15849_length_160_cov_2.186992_g15642_i0 PRJNA724039 15849 160 2.186992 3.4991872 Nostoc linckia z16 1628751 Bacteria Bacteria 102 6.3e-24   NR PHK27803.1 1628751 g15642 i0 100 0.975 52 0 97.5 0 3 158 302 353 PHK27803.1 hypothetical protein VF13_41225 [Nostoc linckia z16] diamond 156 102 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc linckia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;