RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA724039" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA724039 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26830803 26830803 PRJNA724039_S_NODE_17001_length_155_cov_0.983051_g16794_i0 PRJNA724039 17001 155 0.983051 1.52372905 Patescibacteria group bacterium 2052139 Bacteria Bacteria 79.7 5.23e-17   NR MFT7452046.1 2052139 g16794 i0 68.6 1.9741935483871 51 16 98.7 0 154 2 19 69 MFT7452046.1 RimJ/RimL family protein N-acetyltransferase [Patescibacteria group bacterium] diamond 306 79.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29894400 29894400 PRJNA724039_S_NODE_13691_length_173_cov_1.426471_g13484_i0 PRJNA724039 13691 173 1.426471 2.46779483 Candidatus Azambacteria bacterium 2053511 Bacteria Bacteria 72.4 1.41e-13   NR HAW91354.1 2053511 g13484 i0 67.9 0.971098265895954 56 18 97.1 0 2 169 163 218 HAW91354.1 AAA family ATPase [Candidatus Azambacteria bacterium] diamond 168 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Azamiibacteriota         Candidatus Azambacteria bacterium
30052073 30052073 PRJNA724039_S_NODE_9391_length_213_cov_1.744318_g9184_i0 PRJNA724039 9391 213 1.744318 3.71539734 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 70.9 2.05e-13   NR HEY2774878.1 2838779 g9184 i0 43 1.11267605633803 79 35 97.2 1 209 3 40 118 HEY2774878.1 DUF2147 domain-containing protein [Candidatus Binatia bacterium] diamond 237 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;