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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA724039" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA724039 · 28 ✖

analysis 1

  • diamond · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12190603 12190603 PRJNA724039_S_NODE_9390_length_213_cov_1.806818_g9183_i0 PRJNA724039 9390 213 1.806818 3.84852234 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87 4.12e-19   NR XP_004352543.1 1257118 g9183 i0 61.3 1.05633802816901 75 25 100 2 1 213 136 210 XP_004352543.1 ribosomal L22e protein family [Acanthamoeba castellanii str. Neff] diamond 225 87 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22388457 22388457 PRJNA724039_S_NODE_11518_length_190_cov_1.248366_g11311_i0 PRJNA724039 11518 190 1.248366 2.3718954 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 67 5.42e-12   NR PRP74141.1 1890364 g11311 i0 70.3 1.01052631578947 64 13 96.3 4 184 2 1 61 PRP74141.1 histone H2A [Planoprotostelium fungivorum] diamond 192 67 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26799007 26799007 PRJNA724039_S_NODE_9061_length_217_cov_3.366667_g8854_i0 PRJNA724039 9061 217 3.366667 7.30566739 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 63.9 9.1e-10   NR KYQ96878.1 361077 g8854 i0 46.8 0.857142857142857 62 33 85.7 0 217 32 691 752 KYQ96878.1 gelation factor [Tieghemostelium lacteum] diamond 186 63.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27052336 27052336 PRJNA724039_S_NODE_5302_length_303_cov_1.733083_g5095_i0 PRJNA724039 5302 303 1.733083 5.25124149 Physarum polycephalum 5791 Evosea other_Eukaryota 153 1.1099999999999998e-41   NR AAG31138.1 5791 g5095 i0 69.9 1.01980198019802 103 28 99 1 302 3 202 304 AAG31138.1 fragmin60 [Physarum polycephalum] diamond 309 153 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
27146589 27146589 PRJNA724039_S_NODE_9462_length_212_cov_2.148571_g9255_i0 PRJNA724039 9462 212 2.148571 4.55497052 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 65.1 3.27e-10   NR XP_004341947.1 1257118 g9255 i0 43.3 0.94811320754717 67 36 94.8 1 5 205 584 648 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 201 65.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27652650 27652650 PRJNA724039_S_NODE_16784_length_156_cov_0.932773_g16577_i0 PRJNA724039 16784 156 0.932773 1.45512588 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.5 6.04e-9   NR XP_004336445.1 1257118 g16577 i0 54 3 50 21 96.2 1 6 155 52 99 XP_004336445.1 Hypothetical protein ACA1_381490 [Acanthamoeba castellanii str. Neff] diamond 468 60.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27684423 27684423 PRJNA724039_S_NODE_11344_length_191_cov_2.980519_g11137_i0 PRJNA724039 11344 191 2.980519 5.69279129 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 6.18e-29   NR XP_004352812.1 1257118 g11137 i0 80.3 0.958115183246073 61 12 95.8 0 190 8 30 90 XP_004352812.1 ribosomal L37ae protein family [Acanthamoeba castellanii str. Neff] diamond 183 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27820843 27820843 PRJNA724039_S_NODE_11204_length_193_cov_1.301282_g10997_i0 PRJNA724039 11204 193 1.301282 2.51147426 Eumycetozoa 142796 Evosea other_Eukaryota 90.1 4.69e-21   NR XP_004366312.1 261658 g10997 i0 61 2.75129533678756 59 23 91.7 0 180 4 46 104 XP_004366312.1 ubiquitin-conjugating enzyme E2 [Cavenderia fasciculata] diamond 531 90.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28188984 28188984 PRJNA724039_S_NODE_17546_length_152_cov_3.017391_g17339_i0 PRJNA724039 17546 152 3.017391 4.58643432 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 41.2 0.0256   NR XP_004339586.1 1257118 g17339 i0 47.8 1.81578947368421 46 24 90.8 0 140 3 38 83 XP_004339586.1 uncharacterized protein ACA1_063370 [Acanthamoeba castellanii str. Neff] diamond 276 41.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28252300 28252300 PRJNA724039_S_NODE_15666_length_161_cov_1.895161_g15459_i0 PRJNA724039 15666 161 1.895161 3.05120921 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 75.1 4.75e-14   NR KAH3744683.1 1580589 g15459 i0 59.6 1.97515527950311 52 21 96.9 0 157 2 1543 1594 KAH3744683.1 hypothetical protein Pelo_13925 [Pelomyxa schiedti] diamond 318 75.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28452349 28452349 PRJNA724039_S_NODE_15086_length_164_cov_2.661417_g14879_i0 PRJNA724039 15086 164 2.661417 4.36472388 root 1 Root_unresolved Root_unresolved 103 1.68e-24   NR AKT93936.1 5778 g14879 i0 88.9 9.87804878048781 54 6 98.8 0 1 162 81 134 AKT93936.1 translation elongation factor Tu [Vermamoeba vermiformis] diamond 1620 104 0.990384615384615 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
28915158 28915158 PRJNA724039_S_NODE_17628_length_152_cov_1.695652_g17421_i0 PRJNA724039 17628 152 1.695652 2.57739104 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 52.4 1.83e-6   NR PRP78810.1 1890364 g17421 i0 56.3 0.947368421052632 48 21 94.7 0 148 5 106 153 PRP78810.1 hypothetical protein PROFUN_00983 [Planoprotostelium fungivorum] diamond 144 52.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29168220 29168220 PRJNA724039_S_NODE_10489_length_200_cov_1.754601_g10282_i0 PRJNA724039 10489 200 1.754601 3.509202 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 63.2 1.33e-9   NR KYQ96878.1 361077 g10282 i0 46.8 1.89 62 31 93 1 192 7 379 438 KYQ96878.1 gelation factor [Tieghemostelium lacteum] diamond 378 63.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30052059 30052059 PRJNA724039_S_NODE_13571_length_174_cov_1.270073_g13364_i0 PRJNA724039 13571 174 1.270073 2.20992702 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 71.6 2.96e-13   NR XP_004336077.1 1257118 g13364 i0 55.8 1.8448275862069 52 23 89.7 0 4 159 45 96 XP_004336077.1 RNA recognition motif domain containing protein [Acanthamoeba castellanii str. Neff] diamond 321 71.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30083657 30083657 PRJNA724039_S_NODE_12292_length_183_cov_2.465753_g12085_i0 PRJNA724039 12292 183 2.465753 4.51232799 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.6 2.09e-7   NR XP_004341947.1 1257118 g12085 i0 43.1 6.73770491803279 58 31 95.1 1 181 8 584 639 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 1233 56.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30083658 30083658 PRJNA724039_S_NODE_12812_length_179_cov_2.288732_g12605_i0 PRJNA724039 12812 179 2.288732 4.09683028 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 7e-4   NR XP_004338998.1 1257118 g12605 i0 45.1 5.6145251396648 51 27 85.5 1 19 171 727 776 XP_004338998.1 Filamin repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 1005 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30463381 30463381 PRJNA724039_S_NODE_15193_length_164_cov_1.212598_g14986_i0 PRJNA724039 15193 164 1.212598 1.98866072 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 73.2 7.27e-14   NR ATE46695.1 1890364 g14986 i0 74.1 0.98780487804878 54 14 98.8 0 162 1 112 165 ATE46695.1 ATPase subunit 6 [Planoprotostelium fungivorum] diamond 162 73.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30715655 30715655 PRJNA724039_S_NODE_2834_length_438_cov_3.336658_g2627_i0 PRJNA724039 2834 438 3.336658 14.61456204 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 97.8 1.86e-20   NR XP_004341947.1 1257118 g2627 i0 39 1.93835616438356 146 83 100 4 438 1 485 624 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 849 97.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31063527 31063527 PRJNA724039_S_NODE_7115_length_252_cov_2.311628_g6908_i0 PRJNA724039 7115 252 2.311628 5.82530256 Heterostelium album PN5 2086695 Evosea other_Eukaryota 61.2 1.26e-8   NR XP_020436833.1 670386 g6908 i0 37.9 1.42857142857143 66 41 78.6 0 205 8 688 753 XP_020436833.1 gelation factor [Heterostelium album PN500] diamond 360 61.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
31484867 31484867 PRJNA724039_S_NODE_16276_length_158_cov_1.355372_g16069_i0 PRJNA724039 16276 158 1.355372 2.14148776 root 1 Root_unresolved Root_unresolved 80.5 3.59e-16   NR KAF2075930.1 133409 g16069 i0 65.4 11.8481012658228 52 18 98.7 0 156 1 90 141 KAF2075930.1 hypothetical protein CYY_002778 [Polysphondylium violaceum] diamond 1872 80.9 0.995055624227441 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31695727 31695727 PRJNA724039_S_NODE_7157_length_251_cov_2.144860_g6950_i0 PRJNA724039 7157 251 2.14486 5.3835986 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 67.4 8.49e-11   NR KAH3767700.1 1580589 g6950 i0 42.4 1.01593625498008 85 46 98 2 247 2 485 569 KAH3767700.1 gelation factor [Pelomyxa schiedti] diamond 255 67.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31758953 31758953 PRJNA724039_S_NODE_6777_length_260_cov_4.982063_g6570_i0 PRJNA724039 6777 260 4.982063 12.9533638 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.9 5.76e-12   NR XP_004341947.1 1257118 g6570 i0 43.9 1.89230769230769 82 43 94.6 2 13 258 547 625 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 492 70.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31948665 31948665 PRJNA724039_S_NODE_13257_length_176_cov_1.402878_g13050_i0 PRJNA724039 13257 176 1.402878 2.46906528 Dictyostelium purpureum 5786 Evosea other_Eukaryota 79.7 5.29e-16   NR XP_003287614.1 5786 g13050 i0 75 0.886363636363636 52 12 88.6 1 176 21 245 295 XP_003287614.1 calcium-regulated actin-bundling protein [Dictyostelium purpureum] diamond 156 79.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32012087 32012087 PRJNA724039_S_NODE_17098_length_154_cov_2.051282_g16891_i0 PRJNA724039 17098 154 2.051282 3.15897428 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 4.9e-4   NR XP_004341947.1 1257118 g16891 i0 50 0.935064935064935 48 22 93.5 1 144 1 551 596 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 144 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32053995 32053995 PRJNA724039_S_NODE_6998_length_255_cov_2.110092_g6791_i0 PRJNA724039 6998 255 2.110092 5.3807346 Evosea 2605435 Evosea other_Eukaryota 107 9.889999999999999e-28   NR KYR02504.1 361077 g6791 i0 63.4 4.75294117647059 82 30 96.5 0 246 1 34 115 KYR02504.1 actin binding protein [Tieghemostelium lacteum] diamond 1212 108 0.990740740740741 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32233843 32233843 PRJNA724039_S_NODE_14778_length_166_cov_1.534884_g14571_i0 PRJNA724039 14778 166 1.534884 2.54790744 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92 4.03e-21   NR XP_004340119.1 1257118 g14571 i0 66 0.957831325301205 53 18 95.8 0 7 165 117 169 XP_004340119.1 NEDD8conjugating enzyme Ubc12, putative [Acanthamoeba castellanii str. Neff] diamond 159 92 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32233857 32233857 PRJNA724039_S_NODE_9398_length_213_cov_1.460227_g9191_i0 PRJNA724039 9398 213 1.460227 3.11028351 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 112 1.36e-28   NR PRP75505.1 1890364 g9191 i0 71.8 1 71 20 100 0 1 213 190 260 PRP75505.1 40S ribosomal protein S4, X isoform-like [Planoprotostelium fungivorum] diamond 213 112 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32391777 32391777 PRJNA724039_S_NODE_16899_length_155_cov_1.983051_g16692_i0 PRJNA724039 16899 155 1.983051 3.07372905 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 78.6 2.61e-15   NR PRP86149.1 1890364 g16692 i0 70 0.967741935483871 50 15 96.8 0 150 1 566 615 PRP86149.1 40S ribosomal protein S16-like [Planoprotostelium fungivorum] diamond 150 78.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;