RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA724011" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA724011 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29799322 29799322 PRJNA724011_P_NODE_40891_length_415_cov_2.695906_g39868_i0 PRJNA724011 40891 415 2.695906 11.1880099 Crogonang virus 12 3062925 Viruses Viruses 52 1.44e-4   NR WPR18034.1 3062925 g39868 i0 29.6 0.903614457831325 125 78 86 3 50 406 614 734 WPR18034.1 MAG: RNA-dependent RNA polymerase [Crogonang virus 12] diamond 375 52 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Crogonang virus 12
30905410 30905410 PRJNA724011_P_NODE_97774_length_248_cov_1.851429_g96751_i0 PRJNA724011 97774 248 1.851429 4.59154392 Crogonang virus 12 3062925 Viruses Viruses 54.7 2.46e-6   NR WPR18034.1 3062925 g96751 i0 41.8 0.955645161290323 79 35 89.5 2 5 226 624 696 WPR18034.1 MAG: RNA-dependent RNA polymerase [Crogonang virus 12] diamond 237 54.7 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Crogonang virus 12

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;