RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA724011" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA724011 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7089714 7089714 PRJNA724011_P_NODE_90746_length_256_cov_1.672131_g89723_i0 PRJNA724011 90746 256 1.672131 4.28065536 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 114 3.7100000000000005e-27   NR HIN28107.1 2026781 g89723 i0 64.3 2.953125 84 27 98.4 1 254 3 336 416 HIN28107.1 glutamine-dependent NAD(+) synthetase [Candidatus Poribacteria bacterium] diamond 756 114 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
9638968 9638968 PRJNA724011_P_NODE_19768_length_661_cov_2.494898_g18760_i0 PRJNA724011 19768 661 2.494898 16.49127578 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 190 5.33e-54   NR MCH8295276.1 2026781 g18760 i0 50.5 1.82904689863843 202 89 91.7 3 612 7 48 238 MCH8295276.1 AMP-binding protein [Candidatus Poribacteria bacterium] diamond 1209 190 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
26830711 26830711 PRJNA724011_P_NODE_40081_length_421_cov_1.681034_g39058_i0 PRJNA724011 40081 421 1.681034 7.07715314 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 71.2 2.88e-11   NR MYG00388.1 2026781 g39058 i0 28.8 2.67933491686461 132 93 93.3 1 414 22 199 330 MYG00388.1 NAD(+) synthase [Candidatus Poribacteria bacterium] diamond 1128 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;