RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA722925" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA722925 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18562086 18562086 PRJNA722925_S_NODE_2375_length_283_cov_1.487805_g2312_i0 PRJNA722925 2375 283 1.487805 4.21048815 Amphibalanus amphitrite 1232801 Arthropoda Arthropoda 136 5.919999999999999e-37   NR KAF0291935.1 1232801 g2312 i0 71.8 0.901060070671378 85 24 90.1 0 6 260 128 212 KAF0291935.1 Cathepsin L [Amphibalanus amphitrite] diamond 255 136 1 Eukaryota Opisthokonta Metazoa Arthropoda Thecostraca Balanomorpha Balanidae Amphibalanus Amphibalanus amphitrite
29389054 29389054 PRJNA722925_S_NODE_7749_length_171_cov_1.746269_g7686_i0 PRJNA722925 7749 171 1.746269 2.98611999 Idotea baltica 82763 Arthropoda Arthropoda 54.7 4.4e-7   NR MCL4142858.1 82763 g7686 i0 70 0.701754385964912 40 12 70.2 0 169 50 165 204 MCL4142858.1 hypothetical protein [Idotea baltica] diamond 120 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Isopoda Idoteidae Idotea Idotea baltica
32085605 32085605 PRJNA722925_S_NODE_4078_length_221_cov_1.353261_g4015_i0 PRJNA722925 4078 221 1.353261 2.99070681 Isotomidae 36141 Arthropoda Arthropoda 123 7.35e-33   NR QBH74304.1 36144 g4015 i0 91.2 3.86877828054299 57 5 77.4 0 220 50 202 258 QBH74304.1 60S ribosomal protein L7 [Isotomurus palustris] diamond 855 124 0.991935483870968 Eukaryota Opisthokonta Metazoa Arthropoda Collembola Entomobryomorpha Isotomidae Isotomurus Isotomurus palustris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;