RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA721440" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA721440 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30336829 30336829 PRJNA721440_S_NODE_3972_length_291_cov_5.991736_g3846_i0 PRJNA721440 3972 291 5.991736 17.43595176 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 47 3.63e-4   NR KAJ8043773.1 206669 g3846 i0 51.1 0.484536082474227 47 23 48.5 0 264 124 53 99 KAJ8043773.1 hypothetical protein HOLleu_11030 [Holothuria leucospilota] diamond 141 47 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32518419 32518419 PRJNA721440_S_NODE_119_length_1168_cov_7.721180_g87_i0 PRJNA721440 119 1168 7.72118 90.1833824 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 162 1.4099999999999999e-42   NR KAJ8047614.1 206669 g87 i0 44.1 2.03167808219178 195 93 48.8 5 28 597 98 281 KAJ8047614.1 hypothetical protein HOLleu_06656 [Holothuria leucospilota] diamond 2373 162 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;