RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA720429" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA720429 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29325617 29325617 PRJNA720429_P_NODE_4909_length_242_cov_0.911243_g4852_i0 PRJNA720429 4909 242 0.911243 2.20520806 Microbotryomycetes sp. JL221 2987685 Fungi Fungi 136 4.69e-35   NR KAK4049731.1 2987685 g4852 i0 86.8 1.79752066115702 76 10 94.2 0 13 240 450 525 KAK4049731.1 Vacuolar import and degradation protein 27 [Microbotryomycetes sp. JL221] diamond 435 136 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes       Microbotryomycetes sp. JL221
32339025 32339025 PRJNA720429_P_NODE_3399_length_250_cov_0.870056_g3342_i0 PRJNA720429 3399 250 0.870056 2.17514 Basidiomycota 5204 Fungi Fungi 87 1.04e-17   NR KAK1927683.1 5418 g3342 i0 49.4 9.48 81 38 97.2 1 243 1 350 427 KAK1927683.1 phosphate transporter [Papiliotrema laurentii] diamond 2370 87.4 0.995423340961098 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Rhynchogastremaceae Papiliotrema Papiliotrema laurentii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;