RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA720429" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA720429 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28851925 28851925 PRJNA720429_P_NODE_2408_length_280_cov_1.487923_g2351_i0 PRJNA720429 2408 280 1.487923 4.1661844 Medioppia subpectinata 1979941 Arthropoda Arthropoda 131 4.34e-36   NR CAD7627118.1 1979941 g2351 i0 75.6 11.3464285714286 86 21 92.1 0 278 21 24 109 CAD7627118.1 unnamed protein product [Medioppia subpectinata] diamond 3177 131 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Oppiidae Medioppia Medioppia subpectinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;