RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA719595" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA719595 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27241617 27241617 PRJNA719595_P_NODE_8523_length_246_cov_0.901734_g8488_i0 PRJNA719595 8523 246 0.901734 2.21826564 Phycomyces blakesleeanus 4837 Fungi Fungi 52 2.08e-5   NR KAL0093496.1 4837 g8488 i0 38.4 4.35365853658537 73 42 85.4 2 36 245 389 461 KAL0093496.1 hypothetical protein F4703DRAFT_1730878, partial [Phycomyces blakesleeanus] diamond 1071 52 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
27305012 27305012 PRJNA719595_P_NODE_3523_length_334_cov_0.896552_g3488_i0 PRJNA719595 3523 334 0.896552 2.99448368 Fennellomyces sp. T- 1329386 Fungi Fungi 48.9 6.2e-4   NR KAI8137181.1 1329386 g3488 i0 58.5 0.368263473053892 41 16 36.8 1 7 129 217 256 KAI8137181.1 NRDE protein-domain-containing protein [Fennellomyces sp. T-0311] diamond 123 48.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Fennellomyces Fennellomyces sp. T-0311

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;