RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA719595" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA719595 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30525909 30525909 PRJNA719595_P_NODE_6693_length_252_cov_0.871508_g6658_i0 PRJNA719595 6693 252 0.871508 2.19620016 Fidelibacterota bacterium 2026760 Bacteria Bacteria 125 6.409999999999999e-32   NR MBL6719717.1 2026760 g6658 i0 89.7 0.80952380952381 68 7 81 0 2 205 412 479 MBL6719717.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Fidelibacterota bacterium] diamond 204 125 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32360222 32360222 PRJNA719595_P_NODE_7319_length_250_cov_0.881356_g7284_i0 PRJNA719595 7319 250 0.881356 2.20339 Fidelibacterota bacterium 2026760 Bacteria Bacteria 168 2.64e-50   NR MEL1222159.1 2026760 g7284 i0 98.8 1.968 82 1 98.4 0 3 248 75 156 MEL1222159.1 DHHA1 domain-containing protein [Fidelibacterota bacterium] diamond 492 168 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;