RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA719595" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA719595 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27873297 27873297 PRJNA719595_P_NODE_8345_length_246_cov_0.901734_g8310_i0 PRJNA719595 8345 246 0.901734 2.21826564 uncultured phage MedDCM-OCT-S46-C1 278008 Viruses Viruses 70.5 4.96e-12   NR YP_009777829.1 2741074 g8310 i0 53.7 2.74390243902439 67 30 81.7 1 242 42 43 108 YP_009777829.1 tail fiber protein [uncultured phage MedDCM-OCT-S46-C10] diamond 675 70.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales   Foussvirus Foussvirus S46C10
30694411 30694411 PRJNA719595_P_NODE_8213_length_247_cov_0.896552_g8178_i0 PRJNA719595 8213 247 0.896552 2.21448344 root 1 Root_unresolved Root_unresolved 51.6 1.27e-5   NR BAR18313.1 1407671 g8178 i0 43.1 2.61133603238866 72 36 87.4 1 6 221 39 105 BAR18313.1 hypothetical protein [uncultured Mediterranean phage uvMED] diamond 645 52 0.992307692307692 Viruses   Heunggongvirae Uroviricota Caudoviricetes       uncultured Mediterranean phage uvMED
31600823 31600823 PRJNA719595_P_NODE_8096_length_247_cov_0.896552_g8061_i0 PRJNA719595 8096 247 0.896552 2.21448344 Prochlorococcus phage P-SSM7 445688 Viruses Viruses 64.7 1.55e-11   NR YP_004324882.1 445688 g8061 i0 68.4 0.923076923076923 38 12 46.2 0 119 6 1 38 YP_004324882.1 hypothetical protein PSSM7_051 [Prochlorococcus phage P-SSM7] diamond 228 64.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Palaemonvirus Palaemonvirus pssm7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;