RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA719595" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 7 ✖

bioproject 1

  • PRJNA719595 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8362823 8362823 PRJNA719595_P_NODE_9207_length_243_cov_0.917647_g9172_i0 PRJNA719595 9207 243 0.917647 2.22988221 Entosiphon sulcatum 101493 Euglenozoa other_Eukaryota 161 3.45e-46   NR ABJ80968.1 101493 g9172 i0 96.3 1.97530864197531 80 3 98.8 0 3 242 131 210 ABJ80968.1 alpha tubulin, partial [Entosiphon sulcatum] diamond 480 161 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
27305015 27305015 PRJNA719595_P_NODE_8963_length_244_cov_0.912281_g8928_i0 PRJNA719595 8963 244 0.912281 2.22596564 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 48.1 4.71e-4   NR KAJ9452925.1 91374 g8928 i0 44.1 0.725409836065574 59 31 70.1 1 58 228 148 206 KAJ9452925.1 Tripeptidyl-peptidase sed3 [Diplonema papillatum] diamond 177 48.1 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
28041752 28041752 PRJNA719595_P_NODE_9565_length_234_cov_2.329193_g9530_i0 PRJNA719595 9565 234 2.329193 5.45031162 Kinetoplastea 5653 Euglenozoa other_Eukaryota 122 8.23e-33   NR CCM14783.1 5670 g9530 i0 78.9 8.76923076923077 76 16 97.4 0 7 234 35 110 CCM14783.1 60S ribosomal protein L13a, putative [Leishmania guyanensis] diamond 2052 122 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania guyanensis
28757305 28757305 PRJNA719595_P_NODE_3207_length_346_cov_1.344322_g3172_i0 PRJNA719595 3207 346 1.344322 4.65135412 Bodo saltans 75058 Euglenozoa other_Eukaryota 138 3.7e-39   NR CUF18645.1 75058 g3172 i0 72.2 0.841040462427746 97 27 84.1 0 1 291 53 149 CUF18645.1 40S ribosomal protein S16, putative [Bodo saltans] diamond 291 138 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
28914970 28914970 PRJNA719595_P_NODE_8888_length_244_cov_0.912281_g8853_i0 PRJNA719595 8888 244 0.912281 2.22596564 Bodo saltans 75058 Euglenozoa other_Eukaryota 62.4 4.63e-9   NR CUE70391.1 75058 g8853 i0 39.5 1.99180327868852 81 41 99.6 1 1 243 1027 1099 CUE70391.1 Hypothetical protein, putative [Bodo saltans] diamond 486 62.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29325601 29325601 PRJNA719595_P_NODE_8209_length_247_cov_0.896552_g8174_i0 PRJNA719595 8209 247 0.896552 2.21448344 Bodo saltans 75058 Euglenozoa other_Eukaryota 90.1 7.36e-19   NR CUG87251.1 75058 g8174 i0 50 0.995951417004049 82 41 99.6 0 246 1 228 309 CUG87251.1 peptidase, putative [Bodo saltans] diamond 246 90.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29546580 29546580 PRJNA719595_P_NODE_5270_length_279_cov_1.276699_g5235_i0 PRJNA719595 5270 279 1.276699 3.56199021 Bodo saltans 75058 Euglenozoa other_Eukaryota 80.9 2.4e-15   NR CUG86718.1 75058 g5235 i0 52.7 0.978494623655914 91 43 97.8 0 279 7 3909 3999 CUG86718.1 Hypothetical protein, putative [Bodo saltans] diamond 273 80.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;