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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA716463" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA716463 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8362103 8362103 PRJNA716463_P_NODE_95727_length_255_cov_2.307692_g95310_i0 PRJNA716463 95727 255 2.307692 5.8846146 Bacteria 2 Bacteria Bacteria 117 1.87e-29   NR MBX7207946.1 2026800 g95310 i0 65.1 2.94117647058824 86 29 100 1 255 1 201 286 MBX7207946.1 isoaspartyl peptidase/L-asparaginase [Verrucomicrobiaceae bacterium] diamond 750 118 0.991525423728814 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
9636597 9636597 PRJNA716463_P_NODE_53408_length_288_cov_2.493023_g52991_i0 PRJNA716463 53408 288 2.493023 7.17990624 Oleiharenicola sp. Vm1 3398393 Bacteria Bacteria 118 5.73e-29   NR WP_415910608.1 3398393 g52991 i0 80.5 1.61458333333333 77 12 77.1 1 288 67 405 481 WP_415910608.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Oleiharenicola sp. Vm1] diamond 465 118 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola sp. Vm1
13461639 13461639 PRJNA716463_P_NODE_44731_length_295_cov_2.927928_g44314_i0 PRJNA716463 44731 295 2.927928 8.6373876 Luteolibacter arcticus 1581411 Bacteria Bacteria 185 1.58e-53   NR WP_264490580.1 1581411 g44314 i0 87.4 1.04745762711864 103 8 99.7 1 295 2 336 438 WP_264490580.1 methyltransferase domain-containing protein [Luteolibacter arcticus] diamond 309 185 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter arcticus
13461963 13461963 PRJNA716463_P_NODE_64631_length_280_cov_2.574879_g64214_i0 PRJNA716463 64631 280 2.574879 7.2096612 Rariglobus sp. 2706526 Bacteria Bacteria 74.3 1.52e-13   NR MDF3058217.1 2706526 g64214 i0 76.1 0.492857142857143 46 11 49.3 0 142 279 181 226 MDF3058217.1 two component transcriptional regulator, LytTR family [Rariglobus sp.] diamond 138 74.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
26608617 26608617 PRJNA716463_P_NODE_7981_length_403_cov_2.366667_g7568_i0 PRJNA716463 7981 403 2.366667 9.53766801 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 74.7 2.05e-13   NR MBV9008586.1 2026799 g7568 i0 37.2 0.96029776674938 129 69 96 4 396 10 59 175 MBV9008586.1 VPDSG-CTERM sorting domain-containing protein [Verrucomicrobiota bacterium] diamond 387 74.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
26650748 26650748 PRJNA716463_P_NODE_25261_length_310_cov_2.962025_g24844_i0 PRJNA716463 25261 310 2.962025 9.1822775 Prosthecobacter 48463 Bacteria Bacteria 187 2.99e-53   NR WP_377165974.1 445931 g24844 i0 83.8 7.51935483870968 111 9 98.7 1 308 3 125 235 WP_377165974.1 hypothetical protein [Prosthecobacter fluviatilis] diamond 2331 187 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter fluviatilis
27083679 27083679 PRJNA716463_P_NODE_85902_length_264_cov_1.371728_g85485_i0 PRJNA716463 85902 264 1.371728 3.62136192 Terrimicrobiaceae bacterium 2832348 Bacteria Bacteria 94.4 7.5e-21   NR HRJ72634.1 2832348 g85485 i0 84.5 0.659090909090909 58 8 64.8 1 175 5 182 239 HRJ72634.1 hemolysin family protein [Terrimicrobiaceae bacterium] diamond 174 94.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae   Terrimicrobiaceae bacterium
28062646 28062646 PRJNA716463_P_NODE_36325_length_299_cov_3.261062_g35908_i0 PRJNA716463 36325 299 3.261062 9.75057538 Prosthecobacter sp. 1965333 Bacteria Bacteria 103 1.3899999999999998e-23   NR WP_294397657.1 1965333 g35908 i0 98 2.45819397993311 49 1 49.2 0 297 151 200 248 WP_294397657.1 sulfatase [Prosthecobacter sp.] diamond 735 103 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
28094291 28094291 PRJNA716463_P_NODE_24545_length_310_cov_3.033755_g24128_i0 PRJNA716463 24545 310 3.033755 9.4046405 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 118 2.06e-30   NR HTS16620.1 2499141 g24128 i0 53.1 2.5258064516129 130 32 97.7 1 3 305 105 234 HTS16620.1 SDR family oxidoreductase [Verrucomicrobiia bacterium] diamond 783 118 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28220384 28220384 PRJNA716463_P_NODE_104126_length_248_cov_0.880000_g103709_i0 PRJNA716463 104126 248 0.88 2.1824 Methylacidimicrobium sp. AP8 2730359 Bacteria Bacteria 83.6 1.63e-16   NR WP_202213981.1 2730359 g103709 i0 57.3 0.991935483870968 82 35 99.2 0 2 247 62 143 WP_202213981.1 IS200/IS605 family accessory protein TnpB-related protein [Methylacidimicrobium sp. AP8] diamond 246 83.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota       Methylacidimicrobium Methylacidimicrobium sp. AP8
28851896 28851896 PRJNA716463_P_NODE_82008_length_267_cov_1.587629_g81591_i0 PRJNA716463 82008 267 1.587629 4.23896943 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 53.5 4.49e-6   NR TMP91036.1 2026799 g81591 i0 36.7 0.887640449438202 79 50 88.8 0 253 17 16 94 TMP91036.1 MAG: hypothetical protein E6L07_13950 [Verrucomicrobiota bacterium] diamond 237 53.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28883566 28883566 PRJNA716463_P_NODE_12528_length_338_cov_4.600000_g12113_i0 PRJNA716463 12528 338 4.6 15.548 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 58.9 2.36e-7   NR MBO4544706.1 2026799 g12113 i0 50 0.479289940828402 54 26 47.9 1 199 38 619 671 MBO4544706.1 S8 family serine peptidase [Verrucomicrobiota bacterium] diamond 162 58.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29073286 29073286 PRJNA716463_P_NODE_42968_length_296_cov_3.923767_g42551_i0 PRJNA716463 42968 296 3.923767 11.61435032 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.9 0.0266   NR NBQ55952.1 2026799 g42551 i0 48.6 0.35472972972973 35 17 34.5 1 110 211 169 203 NBQ55952.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 105 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29683176 29683176 PRJNA716463_P_NODE_104190_length_248_cov_0.880000_g103773_i0 PRJNA716463 104190 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 73.6 5.48e-13   NR PAW61946.1 1982330 g103773 i0 48.8 2.03225806451613 84 35 93.1 2 2 232 502 584 PAW61946.1 MAG: hypothetical protein B9S37_03870 [Verrucomicrobiia bacterium Tous-C3TDCM] diamond 504 73.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium Tous-C3TDCM
30146491 30146491 PRJNA716463_P_NODE_17012_length_310_cov_5.337553_g16595_i0 PRJNA716463 17012 310 5.337553 16.5464143 Prosthecobacter vanneervenii 48466 Bacteria Bacteria 63.9 2.97e-9   NR WP_184339930.1 48466 g16595 i0 56 0.483870967741935 50 22 48.4 0 1 150 349 398 WP_184339930.1 hypothetical protein [Prosthecobacter vanneervenii] diamond 150 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter vanneervenii
30209733 30209733 PRJNA716463_P_NODE_13852_length_323_cov_6.896000_g13436_i0 PRJNA716463 13852 323 6.896 22.27408 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 56.2 3.67e-7   NR MBU6402233.1 2026799 g13436 i0 42.9 0.715170278637771 77 41 71.5 2 231 1 34 107 MBU6402233.1 universal stress protein [Verrucomicrobiota bacterium] diamond 231 56.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30620651 30620651 PRJNA716463_P_NODE_96653_length_254_cov_2.524862_g96236_i0 PRJNA716463 96653 254 2.524862 6.41314948 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 129 1.84e-35   NR MEN9842156.1 2026799 g96236 i0 80.5 2.90551181102362 82 16 96.9 0 8 253 45 126 MEN9842156.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 738 129 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30905190 30905190 PRJNA716463_P_NODE_49394_length_291_cov_1.995413_g48977_i0 PRJNA716463 49394 291 1.995413 5.80665183 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 157 1.4e-42   NR MEQ1840604.1 2026801 g48977 i0 86.5 0.989690721649485 96 13 99 0 288 1 322 417 MEQ1840604.1 GumC family protein [Verrucomicrobiales bacterium] diamond 288 157 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
31125908 31125908 PRJNA716463_P_NODE_90195_length_260_cov_2.144385_g89778_i0 PRJNA716463 90195 260 2.144385 5.575401 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 148 7.879999999999997e-42   NR HEY5893907.1 2201154 g89778 i0 74.4 2.93076923076923 86 22 99.2 0 3 260 3 88 HEY5893907.1 TniB family NTP-binding protein [Chthoniobacterales bacterium] diamond 762 148 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
31315958 31315958 PRJNA716463_P_NODE_99595_length_251_cov_3.421348_g99178_i0 PRJNA716463 99595 251 3.421348 8.58758348 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 126 4.68e-35   NR HEU0038023.1 2499141 g99178 i0 93.1 1.38645418326693 58 4 69.3 0 174 1 1 58 HEU0038023.1 IS1595 family transposase [Verrucomicrobiia bacterium] diamond 348 126 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31916947 31916947 PRJNA716463_P_NODE_68177_length_277_cov_4.284314_g67760_i0 PRJNA716463 68177 277 4.284314 11.86754978 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 132 1.28e-33   NR MDB6076274.1 2562705 g67760 i0 71.1 0.974729241877256 90 26 97.5 0 272 3 1405 1494 MDB6076274.1 hypothetical protein [Akkermansiaceae bacterium] diamond 270 132 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
32106737 32106737 PRJNA716463_P_NODE_59038_length_284_cov_2.545024_g58621_i0 PRJNA716463 59038 284 2.545024 7.22786816 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 55.8 1.49e-6   NR MEY4489506.1 2026799 g58621 i0 81.8 0.348591549295775 33 6 34.9 0 99 1 309 341 MEY4489506.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 99 55.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32201740 32201740 PRJNA716463_P_NODE_17758_length_310_cov_4.590717_g17341_i0 PRJNA716463 17758 310 4.590717 14.2312227 Chthoniobacter flavus 191863 Bacteria Bacteria 66.2 4.26e-10   NR WP_006979497.1 191863 g17341 i0 73.5 2.37096774193548 49 13 47.4 0 163 309 305 353 WP_006979497.1 competence/damage-inducible protein A [Chthoniobacter flavus] diamond 735 66.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter flavus
32518397 32518397 PRJNA716463_P_NODE_9059_length_384_cov_3.318328_g8646_i0 PRJNA716463 9059 384 3.318328 12.74237952 Verrucomicrobiales bacterium VVV1 2015575 Bacteria Bacteria 121 2.06e-33   NR OYV05323.1 2015575 g8646 i0 93.8 0.5 64 4 50 0 3 194 9 72 OYV05323.1 MAG: XRE family transcriptional regulator [Verrucomicrobiales bacterium VVV1] diamond 192 121 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium VVV1
32896061 32896061 PRJNA716463_P_NODE_83200_length_266_cov_1.782383_g82783_i0 PRJNA716463 83200 266 1.782383 4.74113878 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 58.5 1.34e-7   NR HEY1171948.1 2499141 g82783 i0 74.2 0.665413533834586 31 8 35 0 65 157 603 633 HEY1171948.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 177 58.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;