contig_metadata
40 rows where analysis = "diamond", bioproject = "PRJNA716463" and tax_phylum = "Spirochaetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13462218 | 13462218 | PRJNA716463_P_NODE_79991_length_268_cov_3.410256_g79574_i0 | PRJNA716463 | 79991 | 268 | 3.410256 | 9.13948608 | Treponema lecithinolyticum | 53418 | Bacteria | Bacteria | 187 | 7.85e-57 | NR | WP_314847611.1 | 53418 | g79574 | i0 | 100 | 0.996268656716418 | 89 | 0 | 99.6 | 0 | 1 | 267 | 138 | 226 | WP_314847611.1 formylglycine-generating enzyme family protein [Treponema lecithinolyticum] | diamond | 267 | 187 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema lecithinolyticum | ||
| 14736545 | 14736545 | PRJNA716463_P_NODE_17812_length_310_cov_4.552743_g17395_i0 | PRJNA716463 | 17812 | 310 | 4.552743 | 14.1135033 | Treponema | 157 | Bacteria | Bacteria | 181 | 4.6499999999999994e-57 | NR | WP_296844869.1 | 166 | g17395 | i0 | 92.8 | 5.63225806451613 | 97 | 6 | 93.9 | 1 | 294 | 4 | 1 | 96 | WP_296844869.1 adenylosuccinate synthetase, partial [Treponema sp.] | diamond | 1746 | 181 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 26956924 | 26956924 | PRJNA716463_P_NODE_40002_length_298_cov_3.524444_g39585_i0 | PRJNA716463 | 40002 | 298 | 3.524444 | 10.50284312 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 103 | 4.279999999999999e-23 | NR | WP_016524832.1 | 51160 | g39585 | i0 | 98 | 0.503355704697987 | 50 | 1 | 50.3 | 0 | 150 | 1 | 656 | 705 | WP_016524832.1 M16 family metallopeptidase [Treponema maltophilum] | diamond | 150 | 103 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 27209847 | 27209847 | PRJNA716463_P_NODE_105662_length_246_cov_3.479769_g105244_i0 | PRJNA716463 | 105662 | 246 | 3.479769 | 8.56023174 | Treponema phagedenis | 162 | Bacteria | Bacteria | 87.8 | 2.4e-18 | NR | WP_174897236.1 | 162 | g105244 | i0 | 61.3 | 0.975609756097561 | 80 | 28 | 93.9 | 2 | 243 | 13 | 63 | 142 | WP_174897236.1 LPP20 family lipoprotein [Treponema phagedenis] | diamond | 240 | 87.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema phagedenis | ||
| 27209860 | 27209860 | PRJNA716463_P_NODE_36702_length_299_cov_3.141593_g36285_i0 | PRJNA716463 | 36702 | 299 | 3.141593 | 9.39336307 | Treponema vincentii | 69710 | Bacteria | Bacteria | 134 | 1.8299999999999997e-35 | NR | WP_016519013.1 | 69710 | g36285 | i0 | 48.8 | 3.21070234113712 | 160 | 21 | 99.3 | 1 | 298 | 2 | 191 | 350 | WP_016519013.1 haloacid dehalogenase-like hydrolase [Treponema vincentii] | diamond | 960 | 134 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 27273296 | 27273296 | PRJNA716463_P_NODE_39743_length_298_cov_3.791111_g39326_i0 | PRJNA716463 | 39743 | 298 | 3.791111 | 11.29751078 | Treponema sp. OMZ 857 | 1643513 | Bacteria | Bacteria | 80.5 | 3.76e-15 | NR | WP_253727479.1 | 1643513 | g39326 | i0 | 75.5 | 1.47986577181208 | 49 | 12 | 49.3 | 0 | 149 | 3 | 553 | 601 | WP_253727479.1 hypothetical protein [Treponema sp. OMZ 857] | diamond | 441 | 80.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 857 | ||
| 27473350 | 27473350 | PRJNA716463_P_NODE_76583_length_271_cov_2.313131_g76166_i0 | PRJNA716463 | 76583 | 271 | 2.313131 | 6.26858501 | Treponema | 157 | Bacteria | Bacteria | 135 | 7.38e-37 | NR | MFC2331348.1 | 166 | g76166 | i0 | 76.7 | 1.99261992619926 | 90 | 21 | 99.6 | 0 | 271 | 2 | 15 | 104 | MFC2331348.1 hypothetical protein [Treponema sp.] | diamond | 540 | 136 | 0.992647058823529 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27505099 | 27505099 | PRJNA716463_P_NODE_69503_length_276_cov_4.172414_g69086_i0 | PRJNA716463 | 69503 | 276 | 4.172414 | 11.51586264 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 187 | 3.28e-59 | NR | WP_238579928.1 | 1580831 | g69086 | i0 | 100 | 2 | 92 | 0 | 100 | 0 | 1 | 276 | 16 | 107 | WP_238579928.1 hypothetical protein, partial [Treponema endosymbiont of Eucomonympha sp.] | diamond | 552 | 187 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 27589238 | 27589238 | PRJNA716463_P_NODE_22384_length_310_cov_3.320675_g21967_i0 | PRJNA716463 | 22384 | 310 | 3.320675 | 10.2940925 | Leptospirales bacterium | 2604146 | Bacteria | Bacteria | 77.4 | 1.68e-14 | NR | MBX7056637.1 | 2604146 | g21967 | i0 | 83.7 | 0.474193548387097 | 49 | 8 | 47.4 | 0 | 4 | 150 | 125 | 173 | MBX7056637.1 enoyl-CoA hydratase/isomerase family protein [Leptospirales bacterium] | diamond | 147 | 77.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospirales bacterium | ||||
| 27599817 | 27599817 | PRJNA716463_P_NODE_122404_length_221_cov_4.581081_g121986_i0 | PRJNA716463 | 122404 | 221 | 4.581081 | 10.12418901 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 53.1 | 5.95e-6 | NR | TXG81242.1 | 2202144 | g121986 | i0 | 50 | 1.80542986425339 | 60 | 28 | 78.7 | 1 | 182 | 9 | 570 | 629 | TXG81242.1 MAG: hypothetical protein E6R13_06515 [Spirochaetota bacterium] | diamond | 399 | 53.5 | 0.992523364485981 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 27652432 | 27652432 | PRJNA716463_P_NODE_42584_length_296_cov_5.843049_g42167_i0 | PRJNA716463 | 42584 | 296 | 5.843049 | 17.29542504 | Treponema sp. | 166 | Bacteria | Bacteria | 88.6 | 2.9e-20 | NR | MCR5402157.1 | 166 | g42167 | i0 | 78.3 | 0.952702702702703 | 46 | 10 | 46.6 | 0 | 2 | 139 | 71 | 116 | MCR5402157.1 ribosome silencing factor [Treponema sp.] | diamond | 282 | 88.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27841560 | 27841560 | PRJNA716463_P_NODE_120364_length_227_cov_8.051948_g119946_i0 | PRJNA716463 | 120364 | 227 | 8.051948 | 18.27792196 | Treponema sp. | 166 | Bacteria | Bacteria | 80.1 | 5.83e-16 | NR | MBQ2234548.1 | 166 | g119946 | i0 | 55.4 | 0.977973568281938 | 74 | 33 | 97.8 | 0 | 225 | 4 | 74 | 147 | MBQ2234548.1 ImmA/IrrE family metallo-endopeptidase [Treponema sp.] | diamond | 222 | 80.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28357251 | 28357251 | PRJNA716463_P_NODE_17726_length_310_cov_4.616034_g17309_i0 | PRJNA716463 | 17726 | 310 | 4.616034 | 14.3097054 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 73.2 | 3.24e-14 | NR | WP_100736474.1 | 408139 | g17309 | i0 | 61.1 | 2.10967741935484 | 54 | 21 | 52.3 | 0 | 305 | 144 | 22 | 75 | WP_100736474.1 DUF1330 domain-containing protein [Leptospira kmetyi] | diamond | 654 | 73.6 | 0.994565217391304 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira kmetyi | ||
| 28473275 | 28473275 | PRJNA716463_P_NODE_121726_length_225_cov_4.519737_g121308_i0 | PRJNA716463 | 121726 | 225 | 4.519737 | 10.16940825 | Treponema sp. | 166 | Bacteria | Bacteria | 111 | 1.2200000000000002e-27 | NR | MCR5400703.1 | 166 | g121308 | i0 | 77 | 0.986666666666667 | 74 | 17 | 98.7 | 0 | 224 | 3 | 103 | 176 | MCR5400703.1 branched-chain amino acid ABC transporter permease [Treponema sp.] | diamond | 222 | 111 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28567851 | 28567851 | PRJNA716463_P_NODE_54587_length_287_cov_3.060748_g54170_i0 | PRJNA716463 | 54587 | 287 | 3.060748 | 8.78434676 | Treponema sp. | 166 | Bacteria | Bacteria | 151 | 1.29e-40 | NR | WP_385981747.1 | 166 | g54170 | i0 | 81.1 | 1.98606271777003 | 95 | 18 | 99.3 | 0 | 1 | 285 | 193 | 287 | WP_385981747.1 DNA polymerase I, partial [Treponema sp.] | diamond | 570 | 151 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28599646 | 28599646 | PRJNA716463_P_NODE_32667_length_300_cov_4.647577_g32250_i0 | PRJNA716463 | 32667 | 300 | 4.647577 | 13.942731 | Treponema sp. Marseille-Q413 | 166 | Bacteria | Bacteria | 147 | 9.56e-39 | NR | WP_255422679.1 | 2766702 | g32250 | i0 | 76.1 | 1.09 | 109 | 16 | 99 | 1 | 3 | 299 | 83 | 191 | WP_255422679.1 fibronectin type III domain-containing protein [Treponema sp. Marseille-Q4130] | diamond | 327 | 147 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4130 | ||
| 28704828 | 28704828 | PRJNA716463_P_NODE_21347_length_310_cov_3.464135_g20930_i0 | PRJNA716463 | 21347 | 310 | 3.464135 | 10.7388185 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 98.2 | 1.16e-23 | NR | WP_059370784.1 | 1580831 | g20930 | i0 | 100 | 0.967741935483871 | 50 | 0 | 48.4 | 0 | 1 | 150 | 47 | 96 | WP_059370784.1 sigma-70 family RNA polymerase sigma factor, partial [Treponema endosymbiont of Eucomonympha sp.] | diamond | 300 | 98.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 28947049 | 28947049 | PRJNA716463_P_NODE_45948_length_293_cov_4.163636_g45531_i0 | PRJNA716463 | 45948 | 293 | 4.163636 | 12.19945348 | Treponema sp. | 166 | Bacteria | Bacteria | 66.2 | 6.03e-12 | NR | WP_385980954.1 | 166 | g45531 | i0 | 59.6 | 0.583617747440273 | 57 | 23 | 58.4 | 0 | 172 | 2 | 1 | 57 | WP_385980954.1 hypothetical protein, partial [Treponema sp.] | diamond | 171 | 66.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29010339 | 29010339 | PRJNA716463_P_NODE_26948_length_310_cov_2.818565_g26531_i0 | PRJNA716463 | 26948 | 310 | 2.818565 | 8.7375515 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 125 | 2.3e-34 | NR | MFC2419960.1 | 51160 | g26531 | i0 | 57.4 | 2.09032258064516 | 108 | 29 | 88.1 | 1 | 274 | 2 | 3 | 110 | MFC2419960.1 MBL fold metallo-hydrolase [Treponema maltophilum] | diamond | 648 | 125 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 29041730 | 29041730 | PRJNA716463_P_NODE_68028_length_278_cov_1.185366_g67611_i0 | PRJNA716463 | 68028 | 278 | 1.185366 | 3.29531748 | Treponema pedis | 409322 | Bacteria | Bacteria | 127 | 2.2299999999999998e-32 | NR | WP_024469562.1 | 409322 | g67611 | i0 | 71.7 | 0.992805755395683 | 92 | 26 | 99.3 | 0 | 278 | 3 | 93 | 184 | WP_024469562.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE [Treponema pedis] | diamond | 276 | 127 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 29546542 | 29546542 | PRJNA716463_P_NODE_31030_length_308_cov_4.940426_g30613_i0 | PRJNA716463 | 31030 | 308 | 4.940426 | 15.21651208 | Leptospira sp. | 178 | Bacteria | Bacteria | 69.3 | 5.11e-12 | NR | NCN11570.1 | 178 | g30613 | i0 | 29.5 | 1.09090909090909 | 112 | 62 | 92.5 | 1 | 6 | 290 | 53 | 164 | NCN11570.1 hypothetical protein [Leptospira sp.] | diamond | 336 | 69.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 29746392 | 29746392 | PRJNA716463_P_NODE_17790_length_310_cov_4.569620_g17373_i0 | PRJNA716463 | 17790 | 310 | 4.56962 | 14.165822 | Treponema | 157 | Bacteria | Bacteria | 91.7 | 4.22e-19 | NR | WP_206181587.1 | 58231 | g17373 | i0 | 89.8 | 1.43225806451613 | 49 | 5 | 47.4 | 0 | 1 | 147 | 48 | 96 | WP_206181587.1 MATE family efflux transporter [Treponema medium] | diamond | 444 | 91.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 29830824 | 29830824 | PRJNA716463_P_NODE_55751_length_286_cov_4.145540_g55334_i0 | PRJNA716463 | 55751 | 286 | 4.14554 | 11.8562444 | Treponema sp. | 166 | Bacteria | Bacteria | 143 | 7.74e-40 | NR | MBP5602590.1 | 166 | g55334 | i0 | 64.2 | 4.97202797202797 | 95 | 34 | 99.7 | 0 | 2 | 286 | 44 | 138 | MBP5602590.1 GNAT family N-acetyltransferase [Treponema sp.] | diamond | 1422 | 143 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30525858 | 30525858 | PRJNA716463_P_NODE_108553_length_244_cov_1.795322_g108135_i0 | PRJNA716463 | 108553 | 244 | 1.795322 | 4.38058568 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 54.7 | 2.33e-6 | NR | MEQ8353695.1 | 2026757 | g108135 | i0 | 41.7 | 2.36065573770492 | 72 | 42 | 88.5 | 0 | 242 | 27 | 405 | 476 | MEQ8353695.1 GAF domain-containing protein [Leptospiraceae bacterium] | diamond | 576 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 30525870 | 30525870 | PRJNA716463_P_NODE_18993_length_310_cov_4.012658_g18576_i0 | PRJNA716463 | 18993 | 310 | 4.012658 | 12.4392398 | Treponema sp. | 166 | Bacteria | Bacteria | 112 | 5.38e-28 | NR | MFC2604024.1 | 166 | g18576 | i0 | 58.9 | 1.03548387096774 | 107 | 40 | 99.7 | 1 | 309 | 1 | 11 | 117 | MFC2604024.1 PrsW family glutamic-type intramembrane protease [Treponema sp.] | diamond | 321 | 112 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30778730 | 30778730 | PRJNA716463_P_NODE_105334_length_247_cov_0.885057_g104917_i0 | PRJNA716463 | 105334 | 247 | 0.885057 | 2.18609079 | Treponema sp. | 166 | Bacteria | Bacteria | 145 | 9.92e-43 | NR | MFC2331301.1 | 166 | g104917 | i0 | 93.8 | 0.983805668016194 | 81 | 5 | 98.4 | 0 | 3 | 245 | 58 | 138 | MFC2331301.1 transcriptional regulator NrdR [Treponema sp.] | diamond | 243 | 145 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30936833 | 30936833 | PRJNA716463_P_NODE_68234_length_277_cov_3.941176_g67817_i0 | PRJNA716463 | 68234 | 277 | 3.941176 | 10.91705752 | Treponema lecithinolyticum | 53418 | Bacteria | Bacteria | 187 | 9.7e-54 | NR | WP_314848038.1 | 53418 | g67817 | i0 | 100 | 2.98916967509025 | 92 | 0 | 99.6 | 0 | 276 | 1 | 527 | 618 | WP_314848038.1 NAD-dependent DNA ligase LigA [Treponema lecithinolyticum] | diamond | 828 | 187 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema lecithinolyticum | ||
| 31073632 | 31073632 | PRJNA716463_P_NODE_101315_length_250_cov_2.197740_g100898_i0 | PRJNA716463 | 101315 | 250 | 2.19774 | 5.49435 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 140 | 2.2e-39 | NR | WP_162502539.1 | 1580831 | g100898 | i0 | 100 | 1.824 | 76 | 0 | 91.2 | 0 | 2 | 229 | 175 | 250 | WP_162502539.1 hypothetical protein [Treponema endosymbiont of Eucomonympha sp.] | diamond | 456 | 140 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 31125899 | 31125899 | PRJNA716463_P_NODE_75375_length_272_cov_2.185930_g74958_i0 | PRJNA716463 | 75375 | 272 | 2.18593 | 5.9457296 | Treponema porcinum | 261392 | Bacteria | Bacteria | 155 | 2.67e-46 | NR | WP_320874359.1 | 261392 | g74958 | i0 | 84.4 | 7.94117647058824 | 90 | 14 | 99.3 | 0 | 3 | 272 | 58 | 147 | WP_320874359.1 flagellar hook-basal body complex protein, partial [Treponema porcinum] | diamond | 2160 | 155 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema porcinum | ||
| 31695514 | 31695514 | PRJNA716463_P_NODE_89197_length_261_cov_1.638298_g88780_i0 | PRJNA716463 | 89197 | 261 | 1.638298 | 4.27595778 | Treponema sp. | 166 | Bacteria | Bacteria | 79.7 | 4.37e-15 | NR | MEE0887558.1 | 166 | g88780 | i0 | 53.8 | 4.06896551724138 | 65 | 30 | 74.7 | 0 | 3 | 197 | 178 | 242 | MEE0887558.1 phosphoenolpyruvate--protein phosphotransferase [Treponema sp.] | diamond | 1062 | 79.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 31790203 | 31790203 | PRJNA716463_P_NODE_75797_length_272_cov_1.472362_g75380_i0 | PRJNA716463 | 75797 | 272 | 1.472362 | 4.00482464 | Treponema sp. | 166 | Bacteria | Bacteria | 93.2 | 5.71e-22 | NR | UKI52841.1 | 166 | g75380 | i0 | 90 | 2.20588235294118 | 50 | 5 | 55.1 | 0 | 272 | 123 | 89 | 138 | UKI52841.1 MAG: flagellar basal body rod protein FlgB [Treponema sp.] | diamond | 600 | 93.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32117401 | 32117401 | PRJNA716463_P_NODE_18158_length_310_cov_4.367089_g17741_i0 | PRJNA716463 | 18158 | 310 | 4.367089 | 13.5379759 | Treponema | 157 | Bacteria | Bacteria | 48.1 | 3.16e-4 | NR | WP_206182240.1 | 58231 | g17741 | i0 | 60 | 2.32258064516129 | 40 | 16 | 38.7 | 0 | 9 | 128 | 101 | 140 | WP_206182240.1 leucine-rich repeat protein [Treponema medium] | diamond | 720 | 48.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 32170272 | 32170272 | PRJNA716463_P_NODE_120958_length_227_cov_2.116883_g120540_i0 | PRJNA716463 | 120958 | 227 | 2.116883 | 4.80532441 | Treponema medium | 58231 | Bacteria | Bacteria | 121 | 3.14e-30 | NR | WP_206181939.1 | 58231 | g120540 | i0 | 85.3 | 0.991189427312775 | 75 | 11 | 99.1 | 0 | 3 | 227 | 417 | 491 | WP_206181939.1 ABC transporter permease [Treponema medium] | diamond | 225 | 121 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 32170279 | 32170279 | PRJNA716463_P_NODE_27318_length_310_cov_2.784810_g26901_i0 | PRJNA716463 | 27318 | 310 | 2.78481 | 8.632911 | Treponema sp. Marseille-Q39 | 166 | Bacteria | Bacteria | 104 | 1.4000000000000002e-23 | NR | WP_187382796.1 | 2766703 | g26901 | i0 | 98 | 0.474193548387097 | 49 | 1 | 47.4 | 0 | 148 | 2 | 125 | 173 | WP_187382796.1 S41 family peptidase [Treponema sp. Marseille-Q3903] | diamond | 147 | 104 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q3903 | ||
| 32360189 | 32360189 | PRJNA716463_P_NODE_44179_length_295_cov_4.405405_g43762_i0 | PRJNA716463 | 44179 | 295 | 4.405405 | 12.99594475 | Treponema lecithinolyticum | 53418 | Bacteria | Bacteria | 175 | 1.27e-50 | NR | WP_021687119.1 | 53418 | g43762 | i0 | 86.7 | 1.14915254237288 | 113 | 0 | 99.7 | 1 | 294 | 1 | 100 | 212 | WP_021687119.1 replicative DNA helicase [Treponema lecithinolyticum] | diamond | 339 | 175 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema lecithinolyticum | ||
| 32455043 | 32455043 | PRJNA716463_P_NODE_19439_length_310_cov_3.877637_g19022_i0 | PRJNA716463 | 19439 | 310 | 3.877637 | 12.0206747 | Treponema socranskii | 53419 | Bacteria | Bacteria | 101 | 3.13e-24 | NR | WP_021329538.1 | 53419 | g19022 | i0 | 82 | 0.590322580645161 | 61 | 11 | 59 | 0 | 126 | 308 | 119 | 179 | WP_021329538.1 helix-turn-helix domain-containing protein [Treponema socranskii] | diamond | 183 | 101 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 32486655 | 32486655 | PRJNA716463_P_NODE_76239_length_271_cov_3.207071_g75822_i0 | PRJNA716463 | 76239 | 271 | 3.207071 | 8.69116241 | Treponema denticola ATCC 3352 | 158 | Bacteria | Bacteria | 69.3 | 2.27e-11 | NR | EMB41671.1 | 999428 | g75822 | i0 | 62.7 | 2.13653136531365 | 67 | 22 | 72 | 3 | 18 | 212 | 530 | 595 | EMB41671.1 polymorphic outer membrane protein [Treponema denticola ATCC 33520] | diamond | 579 | 69.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 32707204 | 32707204 | PRJNA716463_P_NODE_64960_length_280_cov_1.971014_g64543_i0 | PRJNA716463 | 64960 | 280 | 1.971014 | 5.5188392 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 156 | 2.88e-42 | NR | WP_016524925.1 | 51160 | g64543 | i0 | 78.5 | 1.99285714285714 | 93 | 20 | 99.6 | 0 | 279 | 1 | 292 | 384 | WP_016524925.1 hypothetical protein [Treponema maltophilum] | diamond | 558 | 156 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 32833184 | 32833184 | PRJNA716463_P_NODE_108940_length_243_cov_4.617647_g108522_i0 | PRJNA716463 | 108940 | 243 | 4.617647 | 11.22088221 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 164 | 4.3199999999999997e-47 | NR | WP_016526577.1 | 51160 | g108522 | i0 | 97.5 | 1.97530864197531 | 80 | 2 | 98.8 | 0 | 2 | 241 | 54 | 133 | WP_016526577.1 THUMP domain-containing class I SAM-dependent RNA methyltransferase [Treponema maltophilum] | diamond | 480 | 164 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 32864662 | 32864662 | PRJNA716463_P_NODE_21660_length_310_cov_3.421941_g21243_i0 | PRJNA716463 | 21660 | 310 | 3.421941 | 10.6080171 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 99.8 | 2.72e-22 | NR | WP_016525059.1 | 51160 | g21243 | i0 | 76.5 | 0.658064516129032 | 68 | 16 | 65.8 | 0 | 206 | 3 | 29 | 96 | WP_016525059.1 FtsW/RodA/SpoVE family cell cycle protein [Treponema maltophilum] | diamond | 204 | 99.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;