contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA716463" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15221174 | 15221174 | PRJNA716463_P_NODE_110292_length_242_cov_3.437870_g109874_i0 | PRJNA716463 | 110292 | 242 | 3.43787 | 8.3196454 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 79 | 1.94e-15 | NR | MDP1861294.1 | 2026741 | g109874 | i0 | 67.9 | 3.60743801652893 | 56 | 18 | 69.4 | 0 | 75 | 242 | 2 | 57 | MDP1861294.1 ATP-binding cassette domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 873 | 79 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 18559197 | 18559197 | PRJNA716463_P_NODE_11535_length_350_cov_3.877256_g11120_i0 | PRJNA716463 | 11535 | 350 | 3.877256 | 13.570396 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 204 | 2.32e-61 | NR | HEU5170203.1 | 2448054 | g11120 | i0 | 81.4 | 1.93714285714286 | 113 | 21 | 96.9 | 0 | 341 | 3 | 240 | 352 | HEU5170203.1 acetyl ornithine aminotransferase family protein [Gemmatimonadales bacterium] | diamond | 678 | 206 | 0.990291262135922 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 27178265 | 27178265 | PRJNA716463_P_NODE_97582_length_253_cov_3.022222_g97165_i0 | PRJNA716463 | 97582 | 253 | 3.022222 | 7.64622166 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 122 | 2.07e-30 | NR | MEX0911858.1 | 2026742 | g97165 | i0 | 74.4 | 0.972332015810277 | 82 | 21 | 97.2 | 0 | 253 | 8 | 87 | 168 | MEX0911858.1 HD domain-containing phosphohydrolase [Gemmatimonadota bacterium] | diamond | 246 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 27778725 | 27778725 | PRJNA716463_P_NODE_36044_length_299_cov_3.367257_g35627_i0 | PRJNA716463 | 36044 | 299 | 3.367257 | 10.06809843 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 60.5 | 4.35e-8 | NR | HEU0013141.1 | 2029185 | g35627 | i0 | 69.4 | 0.491638795986622 | 49 | 15 | 49.2 | 0 | 146 | 292 | 75 | 123 | HEU0013141.1 SusC/RagA family TonB-linked outer membrane protein [Longimicrobium sp.] | diamond | 147 | 60.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 28325681 | 28325681 | PRJNA716463_P_NODE_46646_length_293_cov_2.872727_g46229_i0 | PRJNA716463 | 46646 | 293 | 2.872727 | 8.41709011 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.9 | 4.8e-10 | NR | MDH3272042.1 | 2026742 | g46229 | i0 | 56.8 | 1.37201365187713 | 44 | 19 | 45.1 | 0 | 2 | 133 | 385 | 428 | MDH3272042.1 M20/M25/M40 family metallo-hydrolase [Gemmatimonadota bacterium] | diamond | 402 | 65.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 29073309 | 29073309 | PRJNA716463_P_NODE_97928_length_253_cov_2.172222_g97511_i0 | PRJNA716463 | 97928 | 253 | 2.172222 | 5.49572166 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 55.1 | 4.23e-7 | NR | HXG45260.1 | 2448054 | g97511 | i0 | 48.2 | 0.66403162055336 | 56 | 29 | 66.4 | 0 | 207 | 40 | 93 | 148 | HXG45260.1 DUF2380 domain-containing protein [Gemmatimonadales bacterium] | diamond | 168 | 55.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29894195 | 29894195 | PRJNA716463_P_NODE_123491_length_215_cov_4.070423_g123073_i0 | PRJNA716463 | 123491 | 215 | 4.070423 | 8.75140945 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 127 | 2.42e-34 | NR | HEX9755445.1 | 2448054 | g123073 | i0 | 85.9 | 2.97209302325581 | 71 | 10 | 99.1 | 0 | 2 | 214 | 171 | 241 | HEX9755445.1 ABC transporter substrate-binding protein [Gemmatimonadales bacterium] | diamond | 639 | 127 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30178296 | 30178296 | PRJNA716463_P_NODE_122332_length_221_cov_5.587838_g121914_i0 | PRJNA716463 | 122332 | 221 | 5.587838 | 12.34912198 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 44.7 | 4.54e-4 | NR | HZB28403.1 | 2448054 | g121914 | i0 | 51.1 | 0.963800904977376 | 45 | 21 | 61.1 | 1 | 85 | 219 | 7 | 50 | HZB28403.1 hypothetical protein [Gemmatimonadales bacterium] | diamond | 213 | 44.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30525895 | 30525895 | PRJNA716463_P_NODE_81893_length_267_cov_1.922680_g81476_i0 | PRJNA716463 | 81893 | 267 | 1.92268 | 5.1335556 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 122 | 1.78e-32 | NR | MDQ4079748.1 | 2026742 | g81476 | i0 | 86.8 | 1.51685393258427 | 68 | 9 | 76.4 | 0 | 267 | 64 | 158 | 225 | MDQ4079748.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 405 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30620632 | 30620632 | PRJNA716463_P_NODE_20053_length_310_cov_3.717300_g19636_i0 | PRJNA716463 | 20053 | 310 | 3.7173 | 11.52363 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 89.4 | 2.66e-18 | NR | HET7250889.1 | 2448054 | g19636 | i0 | 87.2 | 0.454838709677419 | 47 | 6 | 45.5 | 0 | 164 | 304 | 31 | 77 | HET7250889.1 acetyl ornithine aminotransferase family protein [Gemmatimonadales bacterium] | diamond | 141 | 89.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 31790210 | 31790210 | PRJNA716463_P_NODE_90557_length_260_cov_1.395722_g90140_i0 | PRJNA716463 | 90557 | 260 | 1.395722 | 3.6288772 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 122 | 4.48e-30 | NR | HEU4630550.1 | 2026741 | g90140 | i0 | 77.9 | 0.992307692307692 | 86 | 18 | 99.2 | 1 | 260 | 3 | 593 | 677 | HEU4630550.1 ABC transporter permease [Gemmatimonadaceae bacterium] | diamond | 258 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;