RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA716463" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA716463 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29420230 29420230 PRJNA716463_P_NODE_48069_length_292_cov_1.986301_g47652_i0 PRJNA716463 48069 292 1.986301 5.79999892 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 67 1.94e-10   NR KAJ4462351.1 342808 g47652 i0 41.3 0.770547945205479 75 44 77.1 0 290 66 795 869 KAJ4462351.1 ion-transporting P-type ATPase [Paratrimastix pyriformis] diamond 225 67 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30178310 30178310 PRJNA716463_P_NODE_66172_length_279_cov_2.165049_g65755_i0 PRJNA716463 66172 279 2.165049 6.04048671 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 72.4 1.41e-12   NR KAJ4459671.1 342808 g65755 i0 45.6 0.849462365591398 79 43 84.9 0 264 28 7 85 KAJ4459671.1 putative Cysteine proteinase 3 [Paratrimastix pyriformis] diamond 237 72.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;