RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA715462" and tax_phylum = "Candidatus Parvarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parvarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA715462 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8359717 8359717 PRJNA715462_P_NODE_65747_length_243_cov_0.905882_g64951_i0 PRJNA715462 65747 243 0.905882 2.20129326 Nanobdellati 1783276 Archaea Archaea 105 2.18e-24   NR EFD92430.1 662762 g64951 i0 59.7 6.79012345679012 77 31 95.1 0 13 243 389 465 EFD92430.1 MAG: chaperone protein DnaK [Candidatus Parvarchaeum acidophilus ARMAN-5] diamond 1650 105 1 Archaea   Nanobdellati Candidatus Parvarchaeota       Candidatus Parvarchaeum Candidatus Parvarchaeum acidophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;