RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA715462" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30968365 30968365 PRJNA715462_P_NODE_48014_length_257_cov_2.271739_g47218_i0 PRJNA715462 48014 257 2.271739 5.83836923 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 42.7 0.0376   NR MBI4556891.1 2030809 g47218 i0 41 0.455252918287938 39 21 43.2 1 21 131 82 120 MBI4556891.1 DUF1559 domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 117 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31189045 31189045 PRJNA715462_P_NODE_68855_length_241_cov_0.916667_g68059_i0 PRJNA715462 68855 241 0.916667 2.20916747 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 49.3 1.62e-4   NR HOV73257.1 2030809 g68059 i0 54.5 3.79668049792531 44 16 53.5 2 140 12 9 49 HOV73257.1 radical SAM protein [Candidatus Hydrogenedentota bacterium] diamond 915 49.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;