contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA713989" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27336496 | 27336496 | PRJNA713989_S_NODE_1783_length_369_cov_2.115625_g1723_i0 | PRJNA713989 | 1783 | 369 | 2.115625 | 7.80665625 | Geobacillus thermoleovorans | 33941 | Bacteria | Bacteria | 79.3 | 2.71e-15 | NR | AZM68782.1 | 33941 | g1723 | i0 | 71 | 0.504065040650406 | 62 | 16 | 50.4 | 2 | 362 | 177 | 11 | 70 | AZM68782.1 hypothetical protein, partial [Geobacillus thermoleovorans] | diamond | 186 | 79.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus thermoleovorans | ||
| 27778617 | 27778617 | PRJNA713989_S_NODE_5264_length_230_cov_1.712707_g5204_i0 | PRJNA713989 | 5264 | 230 | 1.712707 | 3.9392261 | Geobacillus thermoleovorans | 33941 | Bacteria | Bacteria | 81.6 | 6.44e-17 | NR | AZM68782.1 | 33941 | g5204 | i0 | 70 | 0.782608695652174 | 60 | 16 | 78.3 | 2 | 217 | 38 | 13 | 70 | AZM68782.1 hypothetical protein, partial [Geobacillus thermoleovorans] | diamond | 180 | 81.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus thermoleovorans | ||
| 28473175 | 28473175 | PRJNA713989_S_NODE_10506_length_175_cov_4.547619_g10446_i0 | PRJNA713989 | 10506 | 175 | 4.547619 | 7.95833325 | Geobacillus thermoleovorans | 33941 | Bacteria | Bacteria | 59.3 | 1.01e-8 | NR | AZM68782.1 | 33941 | g10446 | i0 | 69.8 | 1.85142857142857 | 53 | 14 | 90.9 | 2 | 175 | 17 | 20 | 70 | AZM68782.1 hypothetical protein, partial [Geobacillus thermoleovorans] | diamond | 324 | 59.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus thermoleovorans | ||
| 28725682 | 28725682 | PRJNA713989_S_NODE_2527_length_313_cov_2.511364_g2467_i0 | PRJNA713989 | 2527 | 313 | 2.511364 | 7.86056932 | Geobacillus thermoleovorans | 33941 | Bacteria | Bacteria | 70.1 | 4.84e-12 | NR | AZM68782.1 | 33941 | g2467 | i0 | 66.1 | 0.594249201277955 | 62 | 19 | 59.4 | 2 | 8 | 193 | 11 | 70 | AZM68782.1 hypothetical protein, partial [Geobacillus thermoleovorans] | diamond | 186 | 70.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus thermoleovorans | ||
| 30368290 | 30368290 | PRJNA713989_S_NODE_3652_length_268_cov_1.041096_g3592_i0 | PRJNA713989 | 3652 | 268 | 1.041096 | 2.79013728 | Streptomyces sp. OE57 | 3379885 | Bacteria | Bacteria | 44.7 | 0.0106 | NR | WP_413810732.1 | 3379885 | g3592 | i0 | 43.4 | 0.593283582089552 | 53 | 27 | 56 | 1 | 101 | 250 | 267 | 319 | WP_413810732.1 amidohydrolase [Streptomyces sp. OE57] | diamond | 159 | 44.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces lacaronensis | ||
| 31094486 | 31094486 | PRJNA713989_S_NODE_5835_length_221_cov_0.953488_g5775_i0 | PRJNA713989 | 5835 | 221 | 0.953488 | 2.10720848 | Nonomuraea helvata | 37484 | Bacteria | Bacteria | 42.4 | 0.0184 | NR | WP_344984142.1 | 37484 | g5775 | i0 | 33.3 | 0.895927601809955 | 66 | 43 | 89.6 | 1 | 202 | 5 | 38 | 102 | WP_344984142.1 hypothetical protein [Nonomuraea helvata] | diamond | 198 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Nonomuraea | Nonomuraea helvata | ||
| 31347578 | 31347578 | PRJNA713989_S_NODE_10896_length_173_cov_1.169355_g10836_i0 | PRJNA713989 | 10896 | 173 | 1.169355 | 2.02298415 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 42 | 0.0253 | NR | MCB0246607.1 | 2052143 | g10836 | i0 | 48.1 | 2.6878612716763 | 52 | 25 | 88.4 | 2 | 168 | 16 | 29 | 79 | MCB0246607.1 GNAT family N-acetyltransferase [Anaerolineae bacterium] | diamond | 465 | 42 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 31632061 | 31632061 | PRJNA713989_S_NODE_11496_length_169_cov_1.191667_g11436_i0 | PRJNA713989 | 11496 | 169 | 1.191667 | 2.01391723 | Enterococcus faecium | 1352 | Bacteria | Bacteria | 55.5 | 1.49e-8 | NR | PWS23313.1 | 1352 | g11436 | i0 | 82.9 | 0.727810650887574 | 41 | 7 | 72.8 | 0 | 166 | 44 | 19 | 59 | PWS23313.1 hypothetical protein DKP78_13660 [Enterococcus faecium] | diamond | 123 | 55.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecium | ||
| 31821758 | 31821758 | PRJNA713989_S_NODE_3937_length_259_cov_2.790476_g3877_i0 | PRJNA713989 | 3937 | 259 | 2.790476 | 7.22733284 | Bacillus cereus W | 405917 | Bacteria | Bacteria | 68.6 | 3.1e-12 | NR | EDX54383.1 | 405917 | g3877 | i0 | 69.4 | 0.567567567567568 | 49 | 15 | 56.8 | 0 | 45 | 191 | 21 | 69 | EDX54383.1 hypothetical protein BCW_A0021, partial [Bacillus cereus W] | diamond | 147 | 68.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;