contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA706190" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9631330 | 9631330 | PRJNA706190_P_NODE_75648_length_165_cov_0.896552_g75512_i0 | PRJNA706190 | 75648 | 165 | 0.896552 | 1.4793108 | Flaviaesturariibacter flavus | 2502780 | Bacteria | Bacteria | 105 | 1.49e-26 | NR | WP_131450110.1 | 2502780 | g75512 | i0 | 89.1 | 1 | 55 | 6 | 100 | 0 | 1 | 165 | 124 | 178 | WP_131450110.1 ribonuclease HII [Flaviaesturariibacter flavus] | diamond | 165 | 105 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Flaviaestuariibacter | Flaviaesturariibacter flavus | |
| 27273169 | 27273169 | PRJNA706190_P_NODE_7723_length_250_cov_1.791045_g7587_i0 | PRJNA706190 | 7723 | 250 | 1.791045 | 4.4776125 | Flavobacterium rhizophilum | 3163296 | Bacteria | Bacteria | 102 | 4.019999999999999e-23 | NR | WP_408075002.1 | 3163296 | g7587 | i0 | 74.4 | 0.984 | 82 | 21 | 98.4 | 0 | 248 | 3 | 334 | 415 | WP_408075002.1 YfbK domain-containing protein [Flavobacterium rhizophilum] | diamond | 246 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium rhizophilum | |
| 27368292 | 27368292 | PRJNA706190_P_NODE_21323_length_204_cov_1.522581_g21187_i0 | PRJNA706190 | 21323 | 204 | 1.522581 | 3.10606524 | Algibacter sp. L4_22 | 2942477 | Bacteria | Bacteria | 54.3 | 5.75e-7 | NR | WP_249755543.1 | 2942477 | g21187 | i0 | 100 | 0.382352941176471 | 26 | 0 | 38.2 | 0 | 23 | 100 | 139 | 164 | WP_249755543.1 thiamine pyrophosphate-dependent enzyme, partial [Algibacter sp. L4_22] | diamond | 78 | 54.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Algibacter | Algibacter sp. L4_22 | |
| 27399699 | 27399699 | PRJNA706190_P_NODE_89003_length_162_cov_0.920354_g88867_i0 | PRJNA706190 | 89003 | 162 | 0.920354 | 1.49097348 | Hallella sp. | 2980186 | Bacteria | Bacteria | 118 | 2.4599999999999996e-29 | NR | WP_337469263.1 | 2980186 | g88867 | i0 | 100 | 0.981481481481482 | 53 | 0 | 98.1 | 0 | 3 | 161 | 468 | 520 | WP_337469263.1 GH92 family glycosyl hydrolase [Hallella sp.] | diamond | 159 | 118 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Hallella | Hallella sp. | |
| 27589140 | 27589140 | PRJNA706190_P_NODE_72384_length_165_cov_0.896552_g72248_i0 | PRJNA706190 | 72384 | 165 | 0.896552 | 1.4793108 | Hymenobacter rubidus | 1441626 | Bacteria | Bacteria | 92.4 | 2.95e-20 | NR | WP_201982484.1 | 1441626 | g72248 | i0 | 83.3 | 0.981818181818182 | 54 | 9 | 98.2 | 0 | 163 | 2 | 105 | 158 | WP_201982484.1 adenylosuccinate lyase [Hymenobacter rubidus] | diamond | 162 | 92.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter rubidus | |
| 28125789 | 28125789 | PRJNA706190_P_NODE_39865_length_177_cov_1.781250_g39729_i0 | PRJNA706190 | 39865 | 177 | 1.78125 | 3.1528125 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 54.3 | 1.29e-6 | NR | MCK4663537.1 | 2030927 | g39729 | i0 | 36.7 | 1.01694915254237 | 60 | 34 | 94.9 | 1 | 10 | 177 | 253 | 312 | MCK4663537.1 hypothetical protein [Bacteroidales bacterium] | diamond | 180 | 54.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 28788640 | 28788640 | PRJNA706190_P_NODE_28407_length_192_cov_1.468531_g28271_i0 | PRJNA706190 | 28407 | 192 | 1.468531 | 2.81957952 | Urechidicola croceus | 1850246 | Bacteria | Bacteria | 82 | 2.41e-16 | NR | WP_070237854.1 | 1850246 | g28271 | i0 | 58.1 | 3.890625 | 62 | 24 | 93.8 | 1 | 8 | 187 | 186 | 247 | WP_070237854.1 GH1 family beta-glucosidase [Urechidicola croceus] | diamond | 747 | 82 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Urechidicola | Urechidicola croceus | |
| 29514816 | 29514816 | PRJNA706190_P_NODE_63510_length_167_cov_0.881356_g63374_i0 | PRJNA706190 | 63510 | 167 | 0.881356 | 1.47186452 | Cyclobacteriaceae bacterium | 2099675 | Bacteria | Bacteria | 67 | 2.91e-12 | NR | MBL7846895.1 | 2099675 | g63374 | i0 | 68.6 | 3.70059880239521 | 51 | 12 | 91.6 | 2 | 154 | 2 | 60 | 106 | MBL7846895.1 IPExxxVDY family protein [Cyclobacteriaceae bacterium] | diamond | 618 | 67 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cyclobacteriaceae | Cyclobacteriaceae bacterium | ||
| 30305115 | 30305115 | PRJNA706190_P_NODE_91732_length_162_cov_0.920354_g91596_i0 | PRJNA706190 | 91732 | 162 | 0.920354 | 1.49097348 | Paludibacteraceae bacterium | 2748031 | Bacteria | Bacteria | 41.6 | 0.033 | NR | MBR4712753.1 | 2748031 | g91596 | i0 | 28.3 | 0.851851851851852 | 46 | 33 | 85.2 | 0 | 7 | 144 | 146 | 191 | MBR4712753.1 hypothetical protein [Paludibacteraceae bacterium] | diamond | 138 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Paludibacteraceae | Paludibacteraceae bacterium | ||
| 31548048 | 31548048 | PRJNA706190_P_NODE_12096_length_228_cov_1.162011_g11960_i0 | PRJNA706190 | 12096 | 228 | 1.162011 | 2.64938508 | Flavisolibacter | 398041 | Bacteria | Bacteria | 118 | 6.36e-29 | NR | RYY98697.1 | 1869212 | g11960 | i0 | 77.3 | 4.84210526315789 | 75 | 15 | 98.7 | 1 | 226 | 2 | 690 | 762 | RYY98697.1 MAG: methylmalonyl-CoA mutase [Chitinophagaceae bacterium] | diamond | 1104 | 119 | 0.991596638655462 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 32075027 | 32075027 | PRJNA706190_P_NODE_77298_length_164_cov_1.356522_g77162_i0 | PRJNA706190 | 77298 | 164 | 1.356522 | 2.22469608 | Chitinophagaceae bacterium | 1869212 | Bacteria | Bacteria | 97.1 | 1.5899999999999995e-23 | NR | MBL7730784.1 | 1869212 | g77162 | i0 | 81.1 | 0.969512195121951 | 53 | 10 | 97 | 0 | 6 | 164 | 136 | 188 | MBL7730784.1 hypothetical protein [Chitinophagaceae bacterium] | diamond | 159 | 97.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 32296886 | 32296886 | PRJNA706190_P_NODE_1039_length_517_cov_207.331197_g903_i0 | PRJNA706190 | 1039 | 517 | 207.331197 | 1071.90228849 | Phocaeicola vulgatus | 821 | Bacteria | Bacteria | 123 | 8.98e-33 | NR | WP_050229787.1 | 821 | g903 | i0 | 95.2 | 0.731141199226306 | 126 | 6 | 73.1 | 0 | 510 | 133 | 1 | 126 | WP_050229787.1 hypothetical protein [Phocaeicola vulgatus] | diamond | 378 | 123 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola vulgatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;