RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA704949" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12181119 12181119 PRJNA704949_P_NODE_905270_length_276_cov_4.528634_g889936_i0 PRJNA704949 905270 276 4.528634 12.49902984 Plasmopara viticola lesion associated ourmia-like virus 25 2686493 Viruses Viruses 100 2.66e-22   NR YP_010800225.1 2686493 g889936 i0 71.6 0.728260869565217 67 19 72.8 0 60 260 3 69 YP_010800225.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated ourmia-like virus 25] diamond 201 100 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Magoulivirus Magoulivirus fiplasmoparae
28662004 28662004 PRJNA704949_P_NODE_1012987_length_258_cov_1.755981_g997652_i0 PRJNA704949 1012987 258 1.755981 4.53043098 Botourmiaviridae sp. 2808997 Viruses Viruses 154 7.659999999999998e-42   NR XFO98461.1 2808997 g997652 i0 82.1 0.976744186046512 84 15 97.7 0 257 6 433 516 XFO98461.1 RNA-dependent RNA polymerase [Botourmiaviridae sp.] diamond 252 154 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;