RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA704949" and tax_phylum = "Candidatus Delongiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Delongiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28030600 28030600 PRJNA704949_P_NODE_1446945_length_206_cov_0.993631_g1431607_i0 PRJNA704949 1446945 206 0.993631 2.04687986 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 50.8 5.98e-6   NR MCK4981058.1 2044594 g1431607 i0 67.6 1.55825242718447 37 12 53.9 0 25 135 1 37 MCK4981058.1 four helix bundle protein [Candidatus Delongbacteria bacterium] diamond 321 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
28536292 28536292 PRJNA704949_P_NODE_561647_length_363_cov_1.490446_g546336_i0 PRJNA704949 561647 363 1.490446 5.4103189800000004 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 52 5.64e-5   NR MDA3820528.1 2044594 g546336 i0 30.5 0.785123966942149 95 66 78.5 0 286 2 7 101 MDA3820528.1 ABC transporter permease [Candidatus Delongbacteria bacterium] diamond 285 52 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
32675245 32675245 PRJNA704949_P_NODE_238600_length_543_cov_2.293522_g224138_i0 PRJNA704949 238600 543 2.293522 12.45382446 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 108 5.97e-25   NR MBP7460387.1 2044594 g224138 i0 49.6 0.69060773480663 125 55 68.5 3 151 522 4 121 MBP7460387.1 pyrroline-5-carboxylate reductase [Candidatus Delongbacteria bacterium] diamond 375 108 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;