RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA704949" and tax_phylum = "Candidatus Collieribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Collieribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27368031 27368031 PRJNA704949_P_NODE_2131343_length_163_cov_0.912281_g2116004_i0 PRJNA704949 2131343 163 0.912281 1.48701803 Candidatus Collierbacteria bacterium 2053540 Bacteria Bacteria 61.6 2.76e-9   NR MBI2325890.1 2053540 g2116004 i0 48.1 0.957055214723926 52 26 93.9 1 8 160 730 781 MBI2325890.1 DEAD/DEAH box helicase family protein [Candidatus Collierbacteria bacterium] diamond 156 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Collieribacteriota         Candidatus Collierbacteria bacterium
30399660 30399660 PRJNA704949_P_NODE_2186233_length_160_cov_2.576577_g2170894_i0 PRJNA704949 2186233 160 2.576577 4.1225232 Candidatus Collierbacteria bacterium RIFCSPHIGHO2_ 2053540 Bacteria Bacteria 56.2 2.08e-7   NR OGD71946.1 1817722 g2170894 i0 64.7 1.25625 34 12 63.8 0 151 50 287 320 OGD71946.1 MAG: hypothetical protein A2703_01010 [Candidatus Collierbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25] diamond 201 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Collieribacteriota         Candidatus Collierbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;