RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA704949" and tax_phylum = "Artverviricota"

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tax_superkingdom 1

tax_phylum 1

  • Artverviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26956422 26956422 PRJNA704949_P_NODE_1835902_length_175_cov_1.238095_g1820563_i0 PRJNA704949 1835902 175 1.238095 2.16666625 Tobacco vein clearing virus 107324 Viruses Viruses 60.8 6.04e-9   NR NP_569140.1 107324 g1820563 i0 50 0.994285714285714 58 29 99.4 0 2 175 319 376 NP_569140.1 putative cell-to-cell movement protein [Tobacco vein clearing virus] diamond 174 60.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Solendovirus Solendovirus venanicotianae
32580942 32580942 PRJNA704949_P_NODE_1532199_length_198_cov_1.395973_g1516860_i0 PRJNA704949 1532199 198 1.395973 2.76402654 Caulimovirus sp. 2692413 Viruses Viruses 65.1 2.69e-10   NR QHB15111.1 2692413 g1516860 i0 72.5 1.21212121212121 40 11 60.6 0 59 178 81 120 QHB15111.1 ORF2 [Caulimovirus sp.] diamond 240 65.1 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Caulimovirus Caulimovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;