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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA703759" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA703759 · 26 ✖

analysis 1

  • diamond · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7062664 7062664 PRJNA703759_P_NODE_17586_length_326_cov_1.849802_g17110_i0 PRJNA703759 17586 326 1.849802 6.03035452 Metazoa 33208 Chordata Chordata 87.8 1.56e-17   NR EGV93871.1 10029 g17110 i0 71.4 1.50920245398773 70 20 64.4 0 115 324 95 164 EGV93871.1 Period circadian protein-like 1 [Cricetulus griseus] diamond 492 87.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Cricetulus Cricetulus griseus
26829760 26829760 PRJNA703759_P_NODE_43521_length_247_cov_0.896552_g43045_i0 PRJNA703759 43521 247 0.896552 2.21448344 Myxine glutinosa 7769 Chordata Chordata 43.5 0.0199   NR XP_067966282.1 7769 g43045 i0 47.6 0.850202429149798 42 17 44.9 1 3 113 77 118 XP_067966282.1 chymotrypsinogen B-like [Myxine glutinosa] diamond 210 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Myxini Myxiniformes Myxinidae Myxine Myxine glutinosa
27145574 27145574 PRJNA703759_P_NODE_20362_length_308_cov_0.995745_g19886_i0 PRJNA703759 20362 308 0.995745 3.0668946 Branchiostoma floridae 7739 Chordata Chordata 51.2 8.69e-5   NR XP_035683683.1 7739 g19886 i0 69.7 1.28571428571429 33 10 32.1 0 169 267 1298 1330 XP_035683683.1 large proline-rich protein BAG6-like isoform X1 [Branchiostoma floridae] diamond 396 51.2 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma floridae
27272468 27272468 PRJNA703759_P_NODE_40383_length_249_cov_0.886364_g39907_i0 PRJNA703759 40383 249 0.886364 2.20704636 Marmota marmota marmota 9994 Chordata Chordata 43.1 0.0254   NR XP_048655345.1 9994 g39907 i0 37.2 1.03614457831325 86 32 95.2 5 9 245 55 125 XP_048655345.1 LBH domain-containing protein 2 [Marmota marmota marmota] diamond 258 43.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Sciuridae Marmota Marmota marmota
27410272 27410272 PRJNA703759_P_NODE_50463_length_242_cov_0.923077_g49987_i0 PRJNA703759 50463 242 0.923077 2.23384634 Chordata 7711 Chordata Chordata 84.3 8.32e-17   NR XP_061437485.1 7753 g49987 i0 60.8 14.095041322314 79 31 97.9 0 6 242 272 350 XP_061437485.1 LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily A member 1-like [Lethenteron reissneri] diamond 3411 84.7 0.995277449822904 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lethenteron Lethenteron reissneri
27588439 27588439 PRJNA703759_P_NODE_43684_length_247_cov_0.896552_g43208_i0 PRJNA703759 43684 247 0.896552 2.21448344 Ranitomeya imitator 111125 Chordata Chordata 44.7 0.00794   NR XP_069619144.1 111125 g43208 i0 37.3 1.21457489878543 51 30 61.9 1 155 3 9 57 XP_069619144.1 E3 ubiquitin/ISG15 ligase TRIM25-like [Ranitomeya imitator] diamond 300 44.7 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
27777928 27777928 PRJNA703759_P_NODE_9704_length_435_cov_0.803867_g9228_i0 PRJNA703759 9704 435 0.803867 3.49682145 Petromyzon marinus 7757 Chordata Chordata 110 7.240000000000001e-27   NR XP_032823695.1 7757 g9228 i0 64.1 1.55862068965517 78 28 53.8 0 434 201 148 225 XP_032823695.1 phosphoserine phosphatase [Petromyzon marinus] diamond 678 110 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
27809538 27809538 PRJNA703759_P_NODE_37864_length_251_cov_0.876404_g37388_i0 PRJNA703759 37864 251 0.876404 2.19977404 Rousettus aegyptiacus 9407 Chordata Chordata 43.1 0.0122   NR KAF6447397.1 9407 g37388 i0 43.4 0.908366533864542 76 29 81.3 2 28 231 33 102 KAF6447397.1 hypothetical protein HJG63_011859 [Rousettus aegyptiacus] diamond 228 43.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
28061869 28061869 PRJNA703759_P_NODE_50025_length_243_cov_0.858824_g49549_i0 PRJNA703759 50025 243 0.858824 2.08694232 Callipepla squamata 9009 Chordata Chordata 48.1 4.84e-4   NR OXB65184.1 9009 g49549 i0 41.5 1.5679012345679 65 37 79 1 52 243 839 903 OXB65184.1 hypothetical protein ASZ78_005300 [Callipepla squamata] diamond 381 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Odontophoridae Callipepla Callipepla squamata
28093494 28093494 PRJNA703759_P_NODE_41945_length_248_cov_0.891429_g41469_i0 PRJNA703759 41945 248 0.891429 2.21074392 Clavelina lepadiformis 159417 Chordata Chordata 52.4 1.56e-5   NR CAK8679388.1 159417 g41469 i0 42.6 0.82258064516129 68 36 82.3 1 43 246 156 220 CAK8679388.1 unnamed protein product [Clavelina lepadiformis] diamond 204 52.4 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Aplousobranchia Clavelinidae Clavelina Clavelina lepadiformis
28472531 28472531 PRJNA703759_P_NODE_38786_length_250_cov_0.881356_g38310_i0 PRJNA703759 38786 250 0.881356 2.20339 Ochotona princeps 9978 Chordata Chordata 50.4 7.96e-5   NR XP_004579362.2 9978 g38310 i0 39.5 4.836 81 49 97.2 0 244 2 150 230 XP_004579362.2 leucine-rich repeat-containing protein 66 [Ochotona princeps] diamond 1209 50.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Ochotonidae Ochotona Ochotona princeps
28977701 28977701 PRJNA703759_P_NODE_12308_length_382_cov_1.666667_g11832_i0 PRJNA703759 12308 382 1.666667 6.36666794 Clavelina lepadiformis 159417 Chordata Chordata 53.1 4.06e-5   NR CAK8684147.1 159417 g11832 i0 50.9 4.5 57 27 44 1 6 173 163 219 CAK8684147.1 unnamed protein product [Clavelina lepadiformis] diamond 1719 53.1 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Aplousobranchia Clavelinidae Clavelina Clavelina lepadiformis
29556893 29556893 PRJNA703759_P_NODE_41670_length_248_cov_0.891429_g41194_i0 PRJNA703759 41670 248 0.891429 2.21074392 Orectolobiformes 30503 Chordata Chordata 66.6 1.54e-10   NR GCC30740.1 137246 g41194 i0 45.1 3.95564516129032 82 42 99.2 2 2 247 792 870 GCC30740.1 hypothetical protein [Chiloscyllium punctatum] diamond 981 67 0.994029850746269 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Orectolobiformes Hemiscylliidae Chiloscyllium Chiloscyllium punctatum
29619758 29619758 PRJNA703759_P_NODE_46510_length_245_cov_0.906977_g46034_i0 PRJNA703759 46510 245 0.906977 2.22209365 Metazoa 33208 Chordata Chordata 51.2 4e-5   NR MEE6486147.1 8439 g46034 i0 40.3 7.04081632653061 72 41 86.9 2 224 12 766 836 MEE6486147.1 hypothetical protein [Ascaphus truei] diamond 1725 51.6 0.992248062015504 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ascaphidae Ascaphus Ascaphus truei
29872863 29872863 PRJNA703759_P_NODE_48691_length_243_cov_1.376471_g48215_i0 PRJNA703759 48691 243 1.376471 3.34482453 Metazoa 33208 Chordata Chordata 47 0.00104   NR XP_010978122.3 9838 g48215 i0 31.3 3.88888888888889 80 33 98.8 2 2 241 10 67 XP_010978122.3 chymotrypsin-like elastase family member 3B [Camelus dromedarius] diamond 945 47 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Camelus Camelus dromedarius
30051075 30051075 PRJNA703759_P_NODE_20191_length_309_cov_1.059322_g19715_i0 PRJNA703759 20191 309 1.059322 3.27330498 Pseudophryne corroboree 495146 Chordata Chordata 64.3 2.23e-9   NR XP_063790493.1 495146 g19715 i0 56.5 3.95145631067961 46 19 43.7 1 21 155 3351 3396 XP_063790493.1 dynein axonemal heavy chain 3 isoform X1 [Pseudophryne corroboree] diamond 1221 64.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Myobatrachidae Pseudophryne Pseudophryne corroboree
30220270 30220270 PRJNA703759_P_NODE_49292_length_243_cov_0.917647_g48816_i0 PRJNA703759 49292 243 0.917647 2.22988221 Pteropus 9401 Chordata Chordata 48.1 4.63e-4   NR XP_024906770.1 9402 g48816 i0 54.3 2.67901234567901 46 16 56.8 1 106 243 40 80 XP_024906770.1 mitochondrial tRNA-specific 2-thiouridylase 1 isoform X7 [Pteropus alecto] diamond 651 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Pteropus Pteropus alecto
30462371 30462371 PRJNA703759_P_NODE_23253_length_292_cov_1.264840_g22777_i0 PRJNA703759 23253 292 1.26484 3.6933328 Bufo gargarizans 30331 Chordata Chordata 58.2 2.58e-7   NR XP_044136758.1 30331 g22777 i0 65.3 1.51027397260274 49 17 50.3 0 107 253 463 511 XP_044136758.1 kinesin-like protein KIF3A isoform X1 [Bufo gargarizans] diamond 441 58.5 0.994871794871795 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufo Bufo gargarizans
30462373 30462373 PRJNA703759_P_NODE_25173_length_284_cov_1.478673_g24697_i0 PRJNA703759 25173 284 1.478673 4.19943132 Branchiostoma lanceolatum 7740 Chordata Chordata 49.3 2.99e-4   NR CAH1230673.1 7740 g24697 i0 38.8 0.707746478873239 67 41 70.8 0 22 222 422 488 CAH1230673.1 VKORC1L1 [Branchiostoma lanceolatum] diamond 201 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma lanceolatum
31294606 31294606 PRJNA703759_P_NODE_25715_length_282_cov_1.392344_g25239_i0 PRJNA703759 25715 282 1.392344 3.92641008 Metazoa 33208 Chordata Chordata 52.4 2.17e-5   NR XP_026921806.2 32536 g25239 i0 56.1 1.72340425531915 41 18 43.6 0 2 124 243 283 XP_026921806.2 retinol dehydrogenase 12 isoform X1 [Acinonyx jubatus] diamond 486 52.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Acinonyx Acinonyx jubatus
31294610 31294610 PRJNA703759_P_NODE_49495_length_243_cov_0.917647_g49019_i0 PRJNA703759 49495 243 0.917647 2.22988221 Metazoa 33208 Chordata Chordata 85.5 3.35e-17   NR XP_053555130.1 8345 g49019 i0 55.6 6 81 21 100 1 1 243 184 249 XP_053555130.1 myotubularin [Bombina bombina] diamond 1458 85.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bombinatoridae Bombina Bombina bombina
31315167 31315167 PRJNA703759_P_NODE_48155_length_244_cov_0.912281_g47679_i0 PRJNA703759 48155 244 0.912281 2.22596564 Callorhinchus milii 7868 Chordata Chordata 124 9.64e-31   NR XP_042197723.1 7868 g47679 i0 66.7 3.97131147540984 81 27 99.6 0 243 1 593 673 XP_042197723.1 probable ATP-dependent RNA helicase DHX35 [Callorhinchus milii] diamond 969 124 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Chimaeriformes Callorhinchidae Callorhinchus Callorhinchus milii
31346903 31346903 PRJNA703759_P_NODE_39776_length_249_cov_1.568182_g39300_i0 PRJNA703759 39776 249 1.568182 3.90477318 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 41.6 0.0476   NR CAI9167457.1 3082113 g39300 i0 37.2 0.939759036144578 78 40 85.5 2 10 222 46 121 CAI9167457.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 234 41.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
32232819 32232819 PRJNA703759_P_NODE_36658_length_252_cov_0.871508_g36182_i0 PRJNA703759 36658 252 0.871508 2.19620016 Pogoniulus pusillus 488313 Chordata Chordata 76.6 5.04e-14   NR XP_063998029.1 488313 g36182 i0 47 3.92857142857143 66 35 78.6 0 55 252 684 749 XP_063998029.1 electroneutral sodium bicarbonate exchanger 1-like [Pogoniulus pusillus] diamond 990 76.6 1 Eukaryota Opisthokonta Metazoa Chordata Aves Piciformes Lybiidae Pogoniulus Pogoniulus pusillus
32390771 32390771 PRJNA703759_P_NODE_29659_length_268_cov_1.420513_g29183_i0 PRJNA703759 29659 268 1.420513 3.80697484 Lampetra fluviatilis 7748 Chordata Chordata 55.1 2.34e-6   NR CAL5910232.1 7748 g29183 i0 33.8 0.861940298507463 77 42 86.2 2 19 249 185 252 CAL5910232.1 unnamed protein product [Lampetra fluviatilis] diamond 231 55.1 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lampetra Lampetra fluviatilis
32623033 32623033 PRJNA703759_P_NODE_21680_length_300_cov_1.374449_g21204_i0 PRJNA703759 21680 300 1.374449 4.123347 Chordata 7711 Chordata Chordata 87.4 1.03e-17   NR DBA16915.1 30357 g21204 i0 76 10.02 50 12 50 0 16 165 125 174 DBA16915.1 TPA: hypothetical protein GDO54_002442 [Pyxicephalus adspersus] diamond 3006 87.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pyxicephalidae Pyxicephalus Pyxicephalus adspersus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;