RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA700095" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA700095 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27145537 27145537 PRJNA700095_P_NODE_60202_length_244_cov_2.385965_g58938_i0 PRJNA700095 60202 244 2.385965 5.8217546 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 59.7 3.75e-8   NR XP_002777447.1 423536 g58938 i0 48.3 0.713114754098361 58 29 70.1 1 172 2 211 268 XP_002777447.1 ankyrin repeat and SOCS box protein, putative [Perkinsus marinus ATCC 50983] diamond 174 59.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27788987 27788987 PRJNA700095_P_NODE_28444_length_319_cov_2.296748_g27180_i0 PRJNA700095 28444 319 2.296748 7.32662612 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 80.1 2.43e-16   NR KAF4700725.1 32597 g27180 i0 46.7 1.97492163009404 105 53 97.8 3 3 314 25 127 KAF4700725.1 Mitochondrial pyruvate carrier 2, partial [Perkinsus olseni] diamond 630 80.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27903775 27903775 PRJNA700095_P_NODE_47185_length_259_cov_1.612903_g45921_i0 PRJNA700095 47185 259 1.612903 4.17741877 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.03   NR TEB19254.1 2494336 g45921 i0 70.4 0.312741312741313 27 8 31.3 0 7 87 237 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 81 43.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
28851001 28851001 PRJNA700095_P_NODE_26168_length_335_cov_1.889313_g24904_i0 PRJNA700095 26168 335 1.889313 6.32919855 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 84.7 1.18e-16   NR XP_002775496.1 423536 g24904 i0 50 1.54925373134328 86 42 77 1 260 3 52 136 XP_002775496.1 membrane fatty acid desaturase, putative [Perkinsus marinus ATCC 50983] diamond 519 84.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30525037 30525037 PRJNA700095_P_NODE_16213_length_453_cov_3.568421_g14950_i0 PRJNA700095 16213 453 3.568421 16.16494713 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 75.5 1.01e-12   NR KAF4689488.1 32597 g14950 i0 28.5 0.9072847682119212 137 95 90.7 1 41 451 40 173 KAF4689488.1 hypothetical protein FOZ60_001611 [Perkinsus olseni] diamond 411 75.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31662847 31662847 PRJNA700095_P_NODE_7617_length_719_cov_7.037152_g6471_i0 PRJNA700095 7617 719 7.037152 50.59712288 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 270 1.82e-88   NR XP_002778466.1 423536 g6471 i0 70 0.792767732962448 190 56 78.9 1 679 113 1 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 570 270 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
32074288 32074288 PRJNA700095_P_NODE_32718_length_298_cov_1.955556_g31454_i0 PRJNA700095 32718 298 1.955556 5.82755688 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 110 2.11e-26   NR KAF4652342.1 32597 g31454 i0 60.5 6.37248322147651 81 30 79.5 1 1 237 257 337 KAF4652342.1 Mitochondrial pyruvate carrier 2 [Perkinsus olseni] diamond 1899 110 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;