RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA700095" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8336274 8336274 PRJNA700095_P_NODE_15487_length_468_cov_1.450633_g14226_i0 PRJNA700095 15487 468 1.450633 6.78896244 Mercenaria mercenaria 6596 Mollusca Mollusca 123 1.65e-29   NR XP_045176201.2 6596 g14226 i0 68.8 3.31410256410256 77 24 49.4 0 466 236 438 514 XP_045176201.2 cryptochrome-1-like isoform X2 [Mercenaria mercenaria] diamond 1551 123 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
14712229 14712229 PRJNA700095_P_NODE_45252_length_263_cov_2.021053_g43988_i0 PRJNA700095 45252 263 2.021053 5.31536939 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 9.21e-28   NR XP_050399576.1 6465 g43988 i0 64.4 8.01901140684411 87 31 99.2 0 1 261 592 678 XP_050399576.1 kinesin-like protein KIFC3 isoform X2 [Patella vulgata] diamond 2109 116 0.991379310344828 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
26682355 26682355 PRJNA700095_P_NODE_48361_length_257_cov_1.108696_g47097_i0 PRJNA700095 48361 257 1.108696 2.84934872 Metazoa 33208 Mollusca Mollusca 102 8.45e-24   NR XP_009053083.1 225164 g47097 i0 60.7 7.83268482490272 84 33 98.1 0 3 254 205 288 XP_009053083.1 hypothetical protein LOTGIDRAFT_174946 [Lottia gigantea] diamond 2013 102 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
27188597 27188597 PRJNA700095_P_NODE_67942_length_232_cov_2.446541_g66677_i0 PRJNA700095 67942 232 2.446541 5.67597512 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 3.2699999999999995e-23   NR RUS82016.1 188477 g66677 i0 59.7 22.9396551724138 77 31 99.6 0 1 231 196 272 RUS82016.1 hypothetical protein EGW08_010207 [Elysia chlorotica] diamond 5322 102 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
27208987 27208987 PRJNA700095_P_NODE_59022_length_245_cov_1.430233_g57758_i0 PRJNA700095 59022 245 1.430233 3.50407085 Magallana gigas 29159 Mollusca Mollusca 48.5 1.92e-4   NR XP_011437085.1 29159 g57758 i0 39 0.942857142857143 77 25 94.3 2 243 13 112 166 XP_011437085.1 neurocalcin homolog [Magallana gigas] diamond 231 48.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
27978300 27978300 PRJNA700095_P_NODE_60165_length_244_cov_2.695906_g58901_i0 PRJNA700095 60165 244 2.695906 6.57801064 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.8 1.5300000000000002e-21   NR KAI8737922.1 6526 g58901 i0 63.8 8.7172131147541 80 29 98.4 0 242 3 557 636 KAI8737922.1 cilia- and flagella-associated protein 58, partial [Biomphalaria glabrata] diamond 2127 98.6 0.991886409736308 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
28072965 28072965 PRJNA700095_P_NODE_20685_length_387_cov_1.770701_g19422_i0 PRJNA700095 20685 387 1.770701 6.85261287 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 3.62e-25   NR XP_050397299.1 6465 g19422 i0 44.2 10.0232558139535 129 70 100 1 1 387 34 160 XP_050397299.1 3-ketodihydrosphingosine reductase [Patella vulgata] diamond 3879 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
28156810 28156810 PRJNA700095_P_NODE_23745_length_355_cov_1.202128_g22481_i0 PRJNA700095 23745 355 1.202128 4.2675544 Mactra antiquata 2302425 Mollusca Mollusca 51.2 1.45e-4   NR KAL4237143.1 2302425 g22481 i0 29.6 0.971830985915493 115 75 97.2 1 7 351 771 879 KAL4237143.1 WD repeat-containing protein 36 [Mactra antiquata] diamond 345 51.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Mactridae Mactra Mactra antiquata
29020556 29020556 PRJNA700095_P_NODE_14728_length_484_cov_1.527981_g13467_i0 PRJNA700095 14728 484 1.527981 7.39542804 Metazoa 33208 Mollusca Mollusca 169 2.11e-46   NR CAE1308340.1 158019 g13467 i0 54.3 14.0640495867769 162 73 99.8 1 484 2 49 210 CAE1308340.1 DDX55 [Acanthosepion pharaonis] diamond 6807 169 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
29072439 29072439 PRJNA700095_P_NODE_52448_length_250_cov_0.870056_g51184_i0 PRJNA700095 52448 250 0.870056 2.17514 Aplysia californica 6500 Mollusca Mollusca 72 1.24e-12   NR XP_012940179.1 6500 g51184 i0 34.2 5.484 76 50 91.2 0 1 228 135 210 XP_012940179.1 homocysteine S-methyltransferase YbgG [Aplysia californica] diamond 1371 72 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
29556875 29556875 PRJNA700095_P_NODE_47570_length_258_cov_2.059459_g46306_i0 PRJNA700095 47570 258 2.059459 5.31340422 Opisthokonta 33154 Mollusca Mollusca 50.1 1.18e-4   NR XP_052061683.1 6549 g46306 i0 57.1 3.88372093023256 42 18 48.8 0 130 5 51 92 XP_052061683.1 ubiquitin-like modifier-activating enzyme 1 isoform X1 [Mytilus californianus] diamond 1002 50.4 0.994047619047619 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
29746230 29746230 PRJNA700095_P_NODE_31250_length_306_cov_1.351931_g29986_i0 PRJNA700095 31250 306 1.351931 4.13690886 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.4 1.44e-4   NR CAC5416223.1 42192 g29986 i0 32.3 3.34313725490196 93 59 91.2 3 304 26 219 307 CAC5416223.1 unnamed protein product [Mytilus coruscus] diamond 1023 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
30125297 30125297 PRJNA700095_P_NODE_11852_length_557_cov_1.964876_g10605_i0 PRJNA700095 11852 557 1.964876 10.94435932 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 100 7.390000000000001e-21   NR XP_070192243.1 31220 g10605 i0 36.8 5.76301615798923 174 86 93.7 5 32 553 370 519 XP_070192243.1 pseudouridylate synthase 7 homolog isoform X2 [Littorina saxatilis] diamond 3210 100 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
30493551 30493551 PRJNA700095_P_NODE_26333_length_334_cov_1.180077_g25069_i0 PRJNA700095 26333 334 1.180077 3.94145718 Saccostrea echinata 191078 Mollusca Mollusca 45.8 0.00806   NR XP_061184117.1 191078 g25069 i0 35.6 0.808383233532934 90 43 67.4 2 10 234 80 169 XP_061184117.1 vacuolar protein sorting-associated protein 37A-like isoform X2 [Saccostrea echinata] diamond 270 45.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
32327797 32327797 PRJNA700095_P_NODE_29219_length_314_cov_2.838174_g27955_i0 PRJNA700095 29219 314 2.838174 8.91186636 Ostrea edulis 37623 Mollusca Mollusca 47.8 0.00152   NR XP_055998271.1 37623 g27955 i0 47.6 1.73885350318471 42 22 40.1 0 309 184 758 799 XP_055998271.1 uncharacterized protein LOC125647533 isoform X1 [Ostrea edulis] diamond 546 47.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
32370419 32370419 PRJNA700095_P_NODE_50939_length_251_cov_1.780899_g49675_i0 PRJNA700095 50939 251 1.780899 4.47005649 Opisthokonta 33154 Mollusca Mollusca 88.6 3.66e-19   NR XP_069136041.1 31199 g49675 i0 55 13.3386454183267 80 33 95.6 1 3 242 173 249 XP_069136041.1 14-3-3 protein epsilon-like isoform X3 [Argopecten irradians] diamond 3348 89.4 0.991051454138702 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
32549112 32549112 PRJNA700095_P_NODE_26179_length_335_cov_1.629771_g24915_i0 PRJNA700095 26179 335 1.629771 5.45973285 Pomacea canaliculata 400727 Mollusca Mollusca 50.1 3.05e-4   NR XP_025109061.1 400727 g24915 i0 46.2 0.582089552238806 65 28 51.9 1 272 99 511 575 XP_025109061.1 nucleoprotein TPR-like isoform X1 [Pomacea canaliculata] diamond 195 50.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;