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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA699078" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA699078 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20310464 20310464 PRJNA699078_S_NODE_87296_length_179_cov_1.600000_g86347_i0 PRJNA699078 87296 179 1.6 2.864 Bacteroidales bacterium 2030927 Bacteria Bacteria 60.1 1.21e-8   NR MCI1779820.1 2030927 g86347 i0 53.4 2.91620111731844 58 25 97.2 1 6 179 648 703 MCI1779820.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Bacteroidales bacterium] diamond 522 60.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
27177338 27177338 PRJNA699078_S_NODE_44082_length_259_cov_2.671429_g43133_i0 PRJNA699078 44082 259 2.671429 6.91900111 uncultured Bacteroides sp. 162156 Bacteria Bacteria 77.8 2.61e-16   NR WP_300852200.1 162156 g43133 i0 44 5.91891891891892 84 47 97.3 0 258 7 24 107 WP_300852200.1 flavodoxin family protein, partial [uncultured Bacteroides sp.] diamond 1533 77.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides uncultured Bacteroides sp.
27536355 27536355 PRJNA699078_S_NODE_33283_length_299_cov_4.016000_g32334_i0 PRJNA699078 33283 299 4.016 12.00784 Porphyromonas 836 Bacteria Bacteria 95.1 2.7e-20   NR WP_004333198.1 28124 g32334 i0 45.5 2.64882943143813 88 47 88.3 1 293 30 442 528 WP_004333198.1 diphosphate--fructose-6-phosphate 1-phosphotransferase [Porphyromonas endodontalis] diamond 792 95.5 0.995811518324607 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas Porphyromonas endodontalis
27903743 27903743 PRJNA699078_S_NODE_100685_length_167_cov_0.881356_g99736_i0 PRJNA699078 100685 167 0.881356 1.47186452 uncultured Bacteroides sp. 162156 Bacteria Bacteria 43.9 0.00525   NR WP_302829521.1 162156 g99736 i0 50 0.682634730538922 38 19 68.3 0 36 149 348 385 WP_302829521.1 alpha-1,3-galactosidase B [uncultured Bacteroides sp.] diamond 114 43.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides uncultured Bacteroides sp.
28724920 28724920 PRJNA699078_S_NODE_53747_length_233_cov_0.847826_g52798_i0 PRJNA699078 53747 233 0.847826 1.97543458 Bacteroidales bacterium 2030927 Bacteria Bacteria 55.5 1.08e-6   NR MCQ2146269.1 2030927 g52798 i0 36.8 4.87982832618026 76 39 97.9 2 233 6 709 775 MCQ2146269.1 4-alpha-glucanotransferase [Bacteroidales bacterium] diamond 1137 55.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
29261445 29261445 PRJNA699078_S_NODE_13909_length_427_cov_1.394180_g12974_i0 PRJNA699078 13909 427 1.39418 5.9531486 Bacteroidia bacterium 2044936 Bacteria Bacteria 45.1 0.0346   NR MBL7927784.1 2044936 g12974 i0 28.6 0.836065573770492 119 77 81.5 4 365 18 183 296 MBL7927784.1 T9SS type A sorting domain-containing protein [Bacteroidia bacterium] diamond 357 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia       Bacteroidia bacterium
29261446 29261446 PRJNA699078_S_NODE_14529_length_420_cov_6.018868_g13591_i0 PRJNA699078 14529 420 6.018868 25.2792456 Marinilabilia salmonicolor 989 Bacteria Bacteria 51.2 2.62e-4   NR WP_234408653.1 989 g13591 i0 36.8 1.8 76 45 54.3 1 116 343 475 547 WP_234408653.1 DUF3417 domain-containing protein [Marinilabilia salmonicolor] diamond 756 51.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Marinilabiliaceae Marinilabilia Marinilabilia salmonicolor
29272644 29272644 PRJNA699078_S_NODE_28529_length_322_cov_1.967033_g27580_i0 PRJNA699078 28529 322 1.967033 6.33384626 Bacteroidia 200643 Bacteria Bacteria 117 2.8699999999999997e-30   NR MDR0968959.1 2026756 g27580 i0 50 6.70807453416149 98 49 91.3 0 20 313 109 206 MDR0968959.1 nitroreductase family protein [Lentimicrobiaceae bacterium] diamond 2160 117 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Lentimicrobiaceae   Lentimicrobiaceae bacterium
29967616 29967616 PRJNA699078_S_NODE_42291_length_265_cov_2.763889_g41342_i0 PRJNA699078 42291 265 2.763889 7.32430585 Bacteria 2 Bacteria Bacteria 52.4 5.44e-6   NR MBC7748233.1 239 g41342 i0 65.8 4.69811320754717 38 12 43 1 5 118 114 150 MBC7748233.1 D-tyrosyl-tRNA(Tyr) deacylase [Flavobacterium sp.] diamond 1245 52.8 0.992424242424242 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
29987988 29987988 PRJNA699078_S_NODE_103871_length_165_cov_0.879310_g102922_i0 PRJNA699078 103871 165 0.87931 1.4508615 Tenacibaculum sp. 1906242 Bacteria Bacteria 48.9 8.52e-5   NR HBI40987.1 1906242 g102922 i0 43.8 1.74545454545455 48 27 87.3 0 164 21 100 147 HBI40987.1 hypothetical protein [Tenacibaculum sp.] diamond 288 48.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Tenacibaculum Tenacibaculum sp.
30304373 30304373 PRJNA699078_S_NODE_33572_length_298_cov_2.751004_g32623_i0 PRJNA699078 33572 298 2.751004 8.19799192 Porphyromonas gingivalis F 837 Bacteria Bacteria 65.5 7.47e-12   NR ERJ68952.1 1227271 g32623 i0 100 0.664429530201342 27 0 27.2 0 36 116 5 31 ERJ68952.1 hypothetical protein HMPREF1555_00132 [Porphyromonas gingivalis F0570] diamond 198 65.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas Porphyromonas gingivalis
30588109 30588109 PRJNA699078_S_NODE_106573_length_163_cov_0.912281_g105624_i0 PRJNA699078 106573 163 0.912281 1.48701803 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 50.4 2.29e-5   NR MBX2900036.1 2099675 g105624 i0 50.9 0.975460122699387 53 26 97.5 0 3 161 316 368 MBX2900036.1 hypothetical protein [Cyclobacteriaceae bacterium] diamond 159 50.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
30904315 30904315 PRJNA699078_S_NODE_102094_length_166_cov_0.888889_g101145_i0 PRJNA699078 102094 166 0.888889 1.47555574 Odoribacter sp. 1965233 Bacteria Bacteria 77.8 4.87e-15   NR MEG0795602.1 1965233 g101145 i0 67.3 5.87349397590361 55 18 99.4 0 166 2 341 395 MEG0795602.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC [Odoribacter sp.] diamond 975 77.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacter Odoribacter sp.
30999055 30999055 PRJNA699078_S_NODE_30374_length_313_cov_0.833333_g29425_i0 PRJNA699078 30374 313 0.833333 2.60833229 Saprospiraceae bacterium 2202734 Bacteria Bacteria 96.7 1.03e-20   NR MCH2046448.1 2202734 g29425 i0 45.1 0.977635782747604 102 56 97.8 0 2 307 65 166 MCH2046448.1 hypothetical protein [Saprospiraceae bacterium] diamond 306 96.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium
31916021 31916021 PRJNA699078_S_NODE_76577_length_192_cov_1.454545_g75628_i0 PRJNA699078 76577 192 1.454545 2.7927264 Bacteroidaceae bacterium 2212467 Bacteria Bacteria 80.1 1.21e-15   NR MBR3455466.1 2212467 g75628 i0 56.5 0.96875 62 26 96.9 1 6 191 378 438 MBR3455466.1 aminoacyl-histidine dipeptidase [Bacteroidaceae bacterium] diamond 186 80.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae   Bacteroidaceae bacterium
32074267 32074267 PRJNA699078_S_NODE_87598_length_179_cov_1.153846_g86649_i0 PRJNA699078 87598 179 1.153846 2.06538434 Chitinophagia bacterium 2448778 Bacteria Bacteria 65.1 3.12e-11   NR NBO50522.1 2448778 g86649 i0 48.3 3.88826815642458 58 30 97.2 0 178 5 71 128 NBO50522.1 UV DNA damage repair endonuclease UvsE [Chitinophagia bacterium] diamond 696 65.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia       Chitinophagia bacterium
32327775 32327775 PRJNA699078_S_NODE_54519_length_231_cov_1.186813_g53570_i0 PRJNA699078 54519 231 1.186813 2.74153803 Bacteroidota bacterium 1898104 Bacteria Bacteria 50.1 8.1e-5   NR MEM9329129.1 1898104 g53570 i0 46 0.649350649350649 50 27 64.9 0 229 80 413 462 MEM9329129.1 ankyrin repeat domain-containing protein [Bacteroidota bacterium] diamond 150 50.1 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;