RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA698538" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA698538 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9609915 9609915 PRJNA698538_S_NODE_27968_length_247_cov_1.327586_g27802_i0 PRJNA698538 27968 247 1.327586 3.27913742 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 130 3.5900000000000004e-33   NR ACM91724.1 6161 g27802 i0 79.3 0.995951417004049 82 17 99.6 0 2 247 628 709 ACM91724.1 90 kDa heat shock protein [Dugesia japonica] diamond 246 130 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
27304101 27304101 PRJNA698538_S_NODE_8603_length_363_cov_1.379310_g8437_i0 PRJNA698538 8603 363 1.37931 5.0068953 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 150 3.209999999999999e-43   NR CBY89195.1 6161 g8437 i0 74.5 0.809917355371901 98 25 81 0 362 69 93 190 CBY89195.1 small HSP protein, partial [Dugesia japonica] diamond 294 150 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
27872374 27872374 PRJNA698538_S_NODE_20485_length_281_cov_1.341346_g20319_i0 PRJNA698538 20485 281 1.341346 3.76918226 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 120 2.65e-32   NR CAL5133512.1 300641 g20319 i0 82.4 1.4626334519573 68 12 72.6 0 276 73 99 166 CAL5133512.1 unnamed protein product [Calicophoron daubneyi] diamond 411 120 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi
28345967 28345967 PRJNA698538_S_NODE_21886_length_274_cov_1.124378_g21720_i0 PRJNA698538 21886 274 1.124378 3.08079572 Clonorchis sinensis 79923 Platyhelminthes Platyhelminthes 52 4.3e-6   NR KAG5443095.1 79923 g21720 i0 37.8 0.81021897810219 74 46 81 0 2 223 40 113 KAG5443095.1 hypothetical protein CSKR_202729 [Clonorchis sinensis] diamond 222 52 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Clonorchis Clonorchis sinensis
29356448 29356448 PRJNA698538_S_NODE_24369_length_261_cov_3.132979_g24203_i0 PRJNA698538 24369 261 3.132979 8.17707519 Mesocestoides corti 53468 Platyhelminthes Platyhelminthes 45.8 0.00246   NR VDD83144.1 53468 g24203 i0 58.8 0.839080459770115 34 14 39.1 0 261 160 142 175 VDD83144.1 unnamed protein product [Mesocestoides corti] diamond 219 45.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
29493895 29493895 PRJNA698538_S_NODE_9850_length_351_cov_1.377698_g9684_i0 PRJNA698538 9850 351 1.377698 4.83571998 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 93.6 6.180000000000001e-21   NR THD27201.1 6192 g9684 i0 51.9 3.4957264957265 81 39 69.2 0 351 109 126 206 THD27201.1 DM9 domain-containing protein [Fasciola hepatica] diamond 1227 94.4 0.991525423728813 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
30935898 30935898 PRJNA698538_S_NODE_30054_length_241_cov_1.154762_g29888_i0 PRJNA698538 30054 241 1.154762 2.78297642 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 105 4.91e-26   NR VZI05055.1 99802 g29888 i0 62.7 0.933609958506224 75 28 93.4 0 238 14 165 239 VZI05055.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 225 105 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;