RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA698538" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA698538 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31062426 31062426 PRJNA698538_S_NODE_12495_length_329_cov_4.472656_g12329_i0 PRJNA698538 12495 329 4.472656 14.71503824 Biomphalaria glabrata 6526 Mollusca Mollusca 44.3 0.0274   NR KAI8775184.1 6526 g12329 i0 29.2 0.811550151975684 89 58 76.6 1 56 307 330 418 KAI8775184.1 piggyBac transposable element-derived protein 4 [Biomphalaria glabrata] diamond 267 44.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
31505001 31505001 PRJNA698538_S_NODE_21596_length_275_cov_2.297030_g21430_i0 PRJNA698538 21596 275 2.29703 6.3168325 Ruditapes philippinarum 129788 Mollusca Mollusca 46.2 0.00224   NR XP_060578927.1 129788 g21430 i0 43.1 2.22545454545455 51 29 55.6 0 209 57 145 195 XP_060578927.1 coiled-coil domain-containing protein 115-like [Ruditapes philippinarum] diamond 612 46.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;