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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA698538" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA698538 · 25 ✖

analysis 1

  • diamond · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17259451 17259451 PRJNA698538_S_NODE_6654_length_385_cov_1.317308_g6488_i0 PRJNA698538 6654 385 1.317308 5.0716358 Streptomyces narbonensis 67333 Bacteria Bacteria 88.6 5.77e-18   NR WP_189513867.1 67333 g6488 i0 58.2 1.23116883116883 79 31 60 1 322 92 203 281 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 474 88.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
24907557 24907557 PRJNA698538_S_NODE_12860_length_327_cov_1.732283_g12694_i0 PRJNA698538 12860 327 1.732283 5.66456541 Streptomyces narbonensis 67333 Bacteria Bacteria 80.1 1.22e-16   NR WP_229833205.1 67333 g12694 i0 77.1 0.440366972477064 48 11 44 0 29 172 71 118 WP_229833205.1 hypothetical protein, partial [Streptomyces narbonensis] diamond 144 80.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
26987657 26987657 PRJNA698538_S_NODE_30362_length_239_cov_2.319277_g30196_i0 PRJNA698538 30362 239 2.319277 5.54307203 Streptomyces narbonensis 67333 Bacteria Bacteria 99.4 8.289999999999999e-23   NR WP_189513867.1 67333 g30196 i0 63.3 1.98326359832636 79 29 99.2 0 3 239 198 276 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 474 99.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
27019462 27019462 PRJNA698538_S_NODE_30042_length_241_cov_1.238095_g29876_i0 PRJNA698538 30042 241 1.238095 2.98380895 Modestobacter sp. 1873466 Bacteria Bacteria 44.7 0.00779   NR MCW2677176.1 1873466 g29876 i0 42.6 0.759336099585062 61 26 64.7 3 73 228 826 886 MCW2677176.1 hypothetical protein [Modestobacter sp.] diamond 183 44.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Geodermatophilales Geodermatophilaceae Modestobacter Modestobacter sp.
27145494 27145494 PRJNA698538_S_NODE_23242_length_267_cov_1.484536_g23076_i0 PRJNA698538 23242 267 1.484536 3.96371112 Streptomyces narbonensis 67333 Bacteria Bacteria 58.2 1.64e-7   NR WP_189513867.1 67333 g23076 i0 50.9 1.23595505617978 55 27 61.8 0 59 223 210 264 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 330 58.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
27177335 27177335 PRJNA698538_S_NODE_24482_length_261_cov_1.228723_g24316_i0 PRJNA698538 24482 261 1.228723 3.20696703 Streptomyces narbonensis 67333 Bacteria Bacteria 69.7 6.39e-13   NR WP_229833205.1 67333 g24316 i0 71.4 3.89655172413793 49 14 56.3 0 30 176 80 128 WP_229833205.1 hypothetical protein, partial [Streptomyces narbonensis] diamond 1017 69.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
27556428 27556428 PRJNA698538_S_NODE_1104_length_631_cov_11.417563_g945_i0 PRJNA698538 1104 631 11.417563 72.04482253 Streptomyces narbonensis 67333 Bacteria Bacteria 47.8 0.0145   NR WP_189513867.1 67333 g945 i0 38.1 0.461172741679873 97 48 40.4 2 423 169 1 97 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 291 47.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
28093400 28093400 PRJNA698538_S_NODE_23865_length_264_cov_1.089005_g23699_i0 PRJNA698538 23865 264 1.089005 2.8749732 Streptomyces narbonensis 67333 Bacteria Bacteria 62 6.67e-9   NR WP_189513867.1 67333 g23699 i0 42.2 2.04545454545455 90 48 98.9 2 3 263 244 332 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 540 62 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
28219460 28219460 PRJNA698538_S_NODE_15246_length_311_cov_2.214286_g15080_i0 PRJNA698538 15246 311 2.214286 6.88642946 Lawsonella clevelandensis 1528099 Bacteria Bacteria 166 7.3e-50   NR WP_304135687.1 1528099 g15080 i0 100 1.7556270096463 91 0 87.8 0 274 2 1 91 WP_304135687.1 hypothetical protein [Lawsonella clevelandensis] diamond 546 166 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Lawsonellaceae Lawsonella Lawsonella clevelandensis
28630385 28630385 PRJNA698538_S_NODE_16967_length_301_cov_0.899123_g16801_i0 PRJNA698538 16967 301 0.899123 2.70636023 Streptomyces narbonensis 67333 Bacteria Bacteria 75.1 8.32e-15   NR WP_229833205.1 67333 g16801 i0 69.8 1.19601328903654 53 16 52.8 0 92 250 77 129 WP_229833205.1 hypothetical protein, partial [Streptomyces narbonensis] diamond 360 75.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
28756424 28756424 PRJNA698538_S_NODE_5847_length_397_cov_2.138889_g5681_i0 PRJNA698538 5847 397 2.138889 8.49138933 Corynebacterium mastitidis 161890 Bacteria Bacteria 63.5 7.31e-9   NR WP_156801801.1 161890 g5681 i0 31.7 0.763224181360202 101 69 76.3 0 395 93 204 304 WP_156801801.1 hypothetical protein [Corynebacterium mastitidis] diamond 303 63.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Corynebacterium mastitidis
29040879 29040879 PRJNA698538_S_NODE_17288_length_299_cov_1.305310_g17122_i0 PRJNA698538 17288 299 1.30531 3.9028769 Streptomyces narbonensis 67333 Bacteria Bacteria 45.4 0.00246   NR WP_229833205.1 67333 g17122 i0 56.4 0.391304347826087 39 17 39.1 0 206 90 65 103 WP_229833205.1 hypothetical protein, partial [Streptomyces narbonensis] diamond 117 45.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
29198658 29198658 PRJNA698538_S_NODE_8129_length_368_cov_1.044068_g7963_i0 PRJNA698538 8129 368 1.044068 3.84217024 Streptomyces narbonensis 67333 Bacteria Bacteria 48.9 9.12e-4   NR WP_189513867.1 67333 g7963 i0 45.2 0.505434782608696 62 29 46.5 1 209 39 1 62 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 186 48.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
30220247 30220247 PRJNA698538_S_NODE_18792_length_290_cov_1.419355_g18626_i0 PRJNA698538 18792 290 1.419355 4.1161295 root 1 Root_unresolved Root_unresolved 43.9 0.021   NR MES6069535.1 1747 g18626 i0 32.9 6.35172413793103 76 45 72.4 2 263 54 108 183 MES6069535.1 RBD-like domain-containing protein [Cutibacterium acnes] diamond 1842 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium acnes
30493527 30493527 PRJNA698538_S_NODE_27913_length_247_cov_1.770115_g27747_i0 PRJNA698538 27913 247 1.770115 4.37218405 Streptomyces narbonensis 67333 Bacteria Bacteria 62.8 2.8e-10   NR WP_229833205.1 67333 g27747 i0 62 0.607287449392713 50 19 60.7 0 238 89 60 109 WP_229833205.1 hypothetical protein, partial [Streptomyces narbonensis] diamond 150 62.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
30682855 30682855 PRJNA698538_S_NODE_10613_length_344_cov_2.988930_g10447_i0 PRJNA698538 10613 344 2.98893 10.2819192 Ilumatobacteraceae bacterium 2497619 Bacteria Bacteria 57.4 8.75e-7   NR HEY4611321.1 2497619 g10447 i0 39.4 0.906976744186046 104 58 89 3 13 318 669 769 HEY4611321.1 HAD-IC family P-type ATPase [Ilumatobacteraceae bacterium] diamond 312 57.4 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales Ilumatobacteraceae   Ilumatobacteraceae bacterium
30746225 30746225 PRJNA698538_S_NODE_8434_length_364_cov_6.134021_g8268_i0 PRJNA698538 8434 364 6.134021 22.32783644 Streptomyces narbonensis 67333 Bacteria Bacteria 67.4 2.53e-10   NR WP_189513867.1 67333 g8268 i0 39.6 0.791208791208791 96 57 78.3 1 363 79 1 96 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 288 67.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
30872567 30872567 PRJNA698538_S_NODE_29614_length_242_cov_1.786982_g29448_i0 PRJNA698538 29614 242 1.786982 4.32449644 Streptomyces narbonensis 67333 Bacteria Bacteria 88.6 9.65e-19   NR WP_189513867.1 67333 g29448 i0 70 1.48760330578512 60 18 74.4 0 182 3 251 310 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 360 88.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
31188212 31188212 PRJNA698538_S_NODE_16435_length_304_cov_1.251082_g16269_i0 PRJNA698538 16435 304 1.251082 3.80328928 Streptomyces narbonensis 67333 Bacteria Bacteria 61.6 1.46e-8   NR WP_189513867.1 67333 g16269 i0 75.6 0.809210526315789 41 10 40.5 0 272 150 211 251 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 246 61.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
31757821 31757821 PRJNA698538_S_NODE_18117_length_294_cov_1.393665_g17951_i0 PRJNA698538 18117 294 1.393665 4.0973751 Streptomyces narbonensis 67333 Bacteria Bacteria 62.4 6.97e-9   NR WP_189513867.1 67333 g17951 i0 63.8 0.959183673469388 47 17 48 0 290 150 150 196 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 282 62.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
31789257 31789257 PRJNA698538_S_NODE_20657_length_280_cov_1.487923_g20491_i0 PRJNA698538 20657 280 1.487923 4.1661844 Streptomyces narbonensis 67333 Bacteria Bacteria 50.8 1.75e-5   NR WP_229833205.1 67333 g20491 i0 46.6 0.621428571428571 58 23 54.6 2 271 119 36 92 WP_229833205.1 hypothetical protein, partial [Streptomyces narbonensis] diamond 174 50.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
31789261 31789261 PRJNA698538_S_NODE_28757_length_245_cov_0.895349_g28591_i0 PRJNA698538 28757 245 0.895349 2.19360505 Streptomyces narbonensis 67333 Bacteria Bacteria 66.6 1.16e-10   NR WP_189513867.1 67333 g28591 i0 50.6 1.93469387755102 79 30 89.4 3 2 220 221 296 WP_189513867.1 RBD-like domain-containing protein [Streptomyces narbonensis] diamond 474 66.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces narbonensis
32244008 32244008 PRJNA698538_S_NODE_25358_length_257_cov_1.255435_g25192_i0 PRJNA698538 25358 257 1.255435 3.22646795 root 1 Root_unresolved Root_unresolved 47 4.11e-4   NR MES9334362.1 1747 g25192 i0 64.7 2.85992217898833 34 11 38.5 1 207 109 57 90 MES9334362.1 endonuclease/exonuclease/phosphatase family protein [Cutibacterium acnes] diamond 735 47 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium acnes
32390673 32390673 PRJNA698538_S_NODE_12799_length_327_cov_3.566929_g12633_i0 PRJNA698538 12799 327 3.566929 11.66385783 Lancefieldella rimae 1383 Bacteria Bacteria 50.8 3.41e-5   NR WP_315572553.1 1383 g12633 i0 34.7 0.871559633027523 95 54 80.7 2 325 62 12 105 WP_315572553.1 hypothetical protein [Lancefieldella rimae] diamond 285 50.8 1 Bacteria   Bacillati Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Lancefieldella Lancefieldella rimae
32611934 32611934 PRJNA698538_S_NODE_23240_length_267_cov_1.515464_g23074_i0 PRJNA698538 23240 267 1.515464 4.04628888 Actinomycetota bacterium 2900548 Bacteria Bacteria 43.9 0.0176   NR MCB0914918.1 2900548 g23074 i0 40.4 0.528089887640449 47 28 52.8 0 113 253 230 276 MCB0914918.1 thioesterase family protein [Actinomycetota bacterium] diamond 141 43.9 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;