RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA698538" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA698538 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28440884 28440884 PRJNA698538_S_NODE_23626_length_265_cov_1.520833_g23460_i0 PRJNA698538 23626 265 1.520833 4.03020745 Hexamita inflata 28002 Fornicata other_Eukaryota 103 7.77e-26   NR CAK8754333.1 28002 g23460 i0 52.3 0.99622641509434 88 37 99.6 1 264 1 38 120 CAK8754333.1 HINF_093951 [Hexamita inflata] diamond 264 103 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31156627 31156627 PRJNA698538_S_NODE_9455_length_354_cov_4.918149_g9289_i0 PRJNA698538 9455 354 4.918149 17.41024746 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 61.6 3.19e-8   NR KAJ5078559.1 1746090 g9289 i0 47.5 1.55084745762712 61 32 51.7 0 2 184 783 843 KAJ5078559.1 alpha-actinin sarcomeric-like protein [Anaeramoeba ignava] diamond 549 61.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;