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contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA695273" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 36 ✖

tax_kingdom 1

bioproject 1

  • PRJNA695273 · 36 ✖

analysis 1

  • diamond · 36 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4506939 4506939 PRJNA695273_P_NODE_77004_length_315_cov_0.954545_g76246_i0 PRJNA695273 77004 315 0.954545 3.00681675 Myxococcales 29 Bacteria Bacteria 180 9.18e-51   NR WP_205628506.1 394096 g76246 i0 82.7 41.6 104 18 99 0 3 314 249 352 WP_205628506.1 ATP-dependent zinc metalloprotease FtsH [Hyalangium minutum] diamond 13104 181 0.994475138121547 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Hyalangium Hyalangium minutum
15979118 15979118 PRJNA695273_P_NODE_111193_length_267_cov_1.448454_g110435_i0 PRJNA695273 111193 267 1.448454 3.86737218 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 167 1.1e-45   NR MBS2019494.1 2026735 g110435 i0 94.3 0.98876404494382 88 5 98.9 0 3 266 1202 1289 MBS2019494.1 sigma 54-interacting transcriptional regulator [Deltaproteobacteria bacterium] diamond 264 167 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
21078594 21078594 PRJNA695273_P_NODE_100717_length_279_cov_1.252427_g99959_i0 PRJNA695273 100717 279 1.252427 3.49427133 Myxococcales bacterium 2026763 Bacteria Bacteria 176 6.71e-50   NR MBU6163219.1 2026763 g99959 i0 97.8 0.989247311827957 92 2 98.9 0 278 3 190 281 MBU6163219.1 RNA polymerase sigma factor RpoD [Myxococcales bacterium] diamond 276 176 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
25408238 25408238 PRJNA695273_P_NODE_110180_length_268_cov_1.579487_g109422_i0 PRJNA695273 110180 268 1.579487 4.23302516 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 158 3.14e-45   NR MDP2343282.1 2026735 g109422 i0 87.5 0.985074626865672 88 11 98.5 0 266 3 179 266 MDP2343282.1 SMC-Scp complex subunit ScpB [Deltaproteobacteria bacterium] diamond 264 158 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26734077 26734077 PRJNA695273_P_NODE_129541_length_250_cov_0.870056_g128783_i0 PRJNA695273 129541 250 0.870056 2.17514 Kofleriaceae bacterium 2212474 Bacteria Bacteria 63.5 1.61e-9   NR HSK00210.1 2212474 g128783 i0 60.8 1.188 51 20 61.2 0 159 7 2 52 HSK00210.1 NADP-dependent oxidoreductase [Kofleriaceae bacterium] diamond 297 63.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
26766208 26766208 PRJNA695273_P_NODE_72841_length_323_cov_1.536000_g72083_i0 PRJNA695273 72841 323 1.536 4.96128 Polyangiaceae bacterium 2268199 Bacteria Bacteria 45.8 0.00722   NR HEX2669415.1 2268199 g72083 i0 31.5 1.70897832817337 92 51 76.2 3 76 321 196 285 HEX2669415.1 expansin EXLX1 family cellulose-binding protein [Polyangiaceae bacterium] diamond 552 45.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27177281 27177281 PRJNA695273_P_NODE_107742_length_271_cov_1.404040_g106984_i0 PRJNA695273 107742 271 1.40404 3.8049484 Archangium gephyra 48 Bacteria Bacteria 182 7.49e-54   NR PZR14364.1 48 g106984 i0 100 0.996309963099631 90 0 99.6 0 271 2 69 158 PZR14364.1 MAG: hypothetical protein DI536_09880 [Archangium gephyra] diamond 270 182 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
27473145 27473145 PRJNA695273_P_NODE_152823_length_243_cov_0.905882_g152065_i0 PRJNA695273 152823 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 144 5.59e-42   NR PZR01884.1 48 g152065 i0 95 1.97530864197531 80 4 98.8 0 3 242 89 168 PZR01884.1 MAG: carbohydrate kinase, partial [Archangium gephyra] diamond 480 145 0.993103448275862 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
27820588 27820588 PRJNA695273_P_NODE_103024_length_276_cov_1.517241_g102266_i0 PRJNA695273 103024 276 1.517241 4.18758516 Pseudomonadati 3379134 Bacteria Bacteria 78.6 4.97e-17   NR HEY0136841.1 1962667 g102266 i0 54.8 6.03260869565217 62 28 67.4 0 1 186 2 63 HEY0136841.1 heavy-metal-associated domain-containing protein [Nannocystis sp.] diamond 1665 79 0.994936708860759 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis sp.
28156715 28156715 PRJNA695273_P_NODE_111945_length_266_cov_1.590674_g111187_i0 PRJNA695273 111945 266 1.590674 4.23119284 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 169 9.73e-51   NR MBM4264956.1 2026735 g111187 i0 96.6 0.992481203007519 88 3 99.2 0 2 265 113 200 MBM4264956.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 264 169 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28345917 28345917 PRJNA695273_P_NODE_141206_length_246_cov_5.098266_g140448_i0 PRJNA695273 141206 246 5.098266 12.54173436 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 79.3 5.66e-16   NR MBW2003019.1 2026735 g140448 i0 45 0.975609756097561 80 42 97.6 1 7 246 8 85 MBW2003019.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 240 79.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28535564 28535564 PRJNA695273_P_NODE_133127_length_249_cov_0.875000_g132369_i0 PRJNA695273 133127 249 0.875 2.17875 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 105 2.23e-25   NR UCH20004.1 2026735 g132369 i0 54.2 1.98795180722892 83 38 100 0 249 1 89 171 UCH20004.1 MAG: class I SAM-dependent methyltransferase [Deltaproteobacteria bacterium] diamond 495 105 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28850935 28850935 PRJNA695273_P_NODE_157888_length_242_cov_0.911243_g157130_i0 PRJNA695273 157888 242 0.911243 2.20520806 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 63.5 1.48e-9   NR MEB2346335.1 2026735 g157130 i0 60.9 0.570247933884298 46 18 57 0 2 139 258 303 MEB2346335.1 lytic murein transglycosylase [Deltaproteobacteria bacterium] diamond 138 63.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28893807 28893807 PRJNA695273_P_NODE_124588_length_251_cov_1.724719_g123830_i0 PRJNA695273 124588 251 1.724719 4.32904469 FCB group 1783270 Bacteria Bacteria 102 1.57e-24   NR WP_095991252.1 43 g123830 i0 56.6 9.8725099601593609 83 36 99.2 0 250 2 154 236 WP_095991252.1 tRNA(His) guanylyltransferase Thg1 family protein [Cystobacter fuscus] diamond 2478 103 0.990291262135922 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
29146920 29146920 PRJNA695273_P_NODE_44129_length_408_cov_0.919403_g43371_i0 PRJNA695273 44129 408 0.919403 3.75116424 root 1 Root_unresolved Root_unresolved 234 2.11e-76   NR HNS90566.1 2026735 g43371 i0 87 1.92647058823529 131 17 96.3 0 408 16 49 179 HNS90566.1 GTP cyclohydrolase I FolE [Deltaproteobacteria bacterium] diamond 786 234 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29399077 29399077 PRJNA695273_P_NODE_132089_length_249_cov_0.875000_g131331_i0 PRJNA695273 132089 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 73.2 7.73e-13   NR MDH4246312.1 2026735 g131331 i0 43.9 2.69879518072289 82 45 98.8 1 2 247 752 832 MDH4246312.1 PAS domain-containing protein [Deltaproteobacteria bacterium] diamond 672 73.6 0.994565217391304 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29577096 29577096 PRJNA695273_P_NODE_145550_length_245_cov_0.895349_g144792_i0 PRJNA695273 145550 245 0.895349 2.19360505 Polyangium spumosum 889282 Bacteria Bacteria 68.2 3.46e-11   NR WP_153821071.1 889282 g144792 i0 73.8 0.514285714285714 42 11 51.4 0 244 119 306 347 WP_153821071.1 Ca2+-dependent phosphoinositide-specific phospholipase C [Polyangium spumosum] diamond 126 68.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium spumosum
29608541 29608541 PRJNA695273_P_NODE_126350_length_251_cov_0.865169_g125592_i0 PRJNA695273 126350 251 0.865169 2.17157419 Polyangiaceae bacterium 2268199 Bacteria Bacteria 45.4 0.00108   NR HEX8796725.1 2268199 g125592 i0 54.8 0.370517928286853 31 14 37.1 0 250 158 7 37 HEX8796725.1 hypothetical protein [Polyangiaceae bacterium] diamond 93 45.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29640147 29640147 PRJNA695273_P_NODE_132110_length_249_cov_0.875000_g131352_i0 PRJNA695273 132110 249 0.875 2.17875 Nannocystaceae bacterium 2545255 Bacteria Bacteria 99 6.52e-22   NR HET6586087.1 2545255 g131352 i0 67.1 0.987951807228916 82 26 98.8 1 3 248 121 201 HET6586087.1 S8 family serine peptidase [Nannocystaceae bacterium] diamond 246 99 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae   Nannocystaceae bacterium
29904482 29904482 PRJNA695273_P_NODE_139231_length_247_cov_0.885057_g138473_i0 PRJNA695273 139231 247 0.885057 2.18609079 Stigmatella 40 Bacteria Bacteria 55.8 9.03e-7   NR WP_225411050.1 394097 g138473 i0 40.7 3.93522267206478 81 44 98.4 2 3 245 317 393 WP_225411050.1 hypothetical protein [Stigmatella hybrida] diamond 972 55.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Stigmatella Stigmatella hybrida
30145541 30145541 PRJNA695273_P_NODE_149512_length_244_cov_0.900585_g148754_i0 PRJNA695273 149512 244 0.900585 2.1974274 Myxococcota bacterium 2818507 Bacteria Bacteria 104 2.11e-25   NR MEK6608750.1 2818507 g148754 i0 60 1.9672131147541 80 32 98.4 0 1 240 97 176 MEK6608750.1 hypothetical protein [Myxococcota bacterium] diamond 480 104 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30240674 30240674 PRJNA695273_P_NODE_118812_length_258_cov_1.659459_g118054_i0 PRJNA695273 118812 258 1.659459 4.28140422 Polyangiaceae bacterium 2268199 Bacteria Bacteria 71.6 2.09e-12   NR HEY1958266.1 2268199 g118054 i0 48.2 0.965116279069767 83 40 96.5 1 3 251 72 151 HEY1958266.1 DUF4178 domain-containing protein [Polyangiaceae bacterium] diamond 249 71.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30272518 30272518 PRJNA695273_P_NODE_129072_length_250_cov_0.870056_g128314_i0 PRJNA695273 129072 250 0.870056 2.17514 Polyangiaceae bacterium 2268199 Bacteria Bacteria 60.8 1.62e-8   NR HEX7601950.1 2268199 g128314 i0 43.5 2.112 85 44 98.4 3 5 250 237 320 HEX7601950.1 aspartate kinase [Polyangiaceae bacterium] diamond 528 60.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30536250 30536250 PRJNA695273_P_NODE_81653_length_306_cov_1.107296_g80895_i0 PRJNA695273 81653 306 1.107296 3.38832576 Pseudomonadati 3379134 Bacteria Bacteria 85.9 2.93e-17   NR MBL9004489.1 2026763 g80895 i0 43.8 1.94117647058824 96 51 94.1 1 298 11 199 291 MBL9004489.1 hypothetical protein [Myxococcales bacterium] diamond 594 85.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30682797 30682797 PRJNA695273_P_NODE_149213_length_244_cov_0.900585_g148455_i0 PRJNA695273 149213 244 0.900585 2.1974274 Polyangiaceae bacterium 2268199 Bacteria Bacteria 74.3 1.27e-13   NR NRA34108.1 2268199 g148455 i0 47.1 1.04508196721311 85 41 99.6 1 1 243 98 182 NRA34108.1 class I SAM-dependent methyltransferase [Polyangiaceae bacterium] diamond 255 74.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30967511 30967511 PRJNA695273_P_NODE_96234_length_284_cov_1.331754_g95476_i0 PRJNA695273 96234 284 1.331754 3.78218136 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 70.9 6.86e-12   NR MBM4359402.1 2026735 g95476 i0 65.5 1.08802816901408 55 18 57 1 121 282 4 58 MBM4359402.1 acyltransferase [Deltaproteobacteria bacterium] diamond 309 70.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30999011 30999011 PRJNA695273_P_NODE_161314_length_241_cov_0.910714_g160556_i0 PRJNA695273 161314 241 0.910714 2.19482074 Polyangiaceae bacterium 2268199 Bacteria Bacteria 97.8 7.54e-22   NR NRA31827.1 2268199 g160556 i0 62.7 4.53112033195021 75 26 93.4 1 239 15 335 407 NRA31827.1 histidine phosphatase family protein [Polyangiaceae bacterium] diamond 1092 97.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31188162 31188162 PRJNA695273_P_NODE_144215_length_246_cov_0.890173_g143457_i0 PRJNA695273 144215 246 0.890173 2.18982558 Myxococcota bacterium 2818507 Bacteria Bacteria 110 1.75e-27   NR HRE87554.1 2818507 g143457 i0 62.2 1 82 30 98.8 1 1 243 71 152 HRE87554.1 hypothetical protein [Myxococcota bacterium] diamond 246 110 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31473306 31473306 PRJNA695273_P_NODE_154716_length_242_cov_2.443787_g153958_i0 PRJNA695273 154716 242 2.443787 5.91396454 Myxococcales bacterium 2026763 Bacteria Bacteria 52.8 1.08e-5   NR MDO9020429.1 2026763 g153958 i0 40 0.867768595041322 70 42 86.8 0 5 214 494 563 MDO9020429.1 NUDIX domain-containing protein [Myxococcales bacterium] diamond 210 52.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31504931 31504931 PRJNA695273_P_NODE_100336_length_279_cov_1.500000_g99578_i0 PRJNA695273 100336 279 1.5 4.185 Archangium gephyra 48 Bacteria Bacteria 97.4 1.4500000000000002e-21   NR WP_053066112.1 48 g99578 i0 53.3 0.967741935483871 90 41 96.8 1 272 3 6 94 WP_053066112.1 hypothetical protein [Archangium gephyra] diamond 270 97.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
31504978 31504978 PRJNA695273_P_NODE_81596_length_306_cov_1.309013_g80838_i0 PRJNA695273 81596 306 1.309013 4.00557978 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.5 0.042   NR TNE87077.1 2026735 g80838 i0 46 0.490196078431373 50 27 49 0 84 233 663 712 TNE87077.1 MAG: hypothetical protein EP330_19080 [Deltaproteobacteria bacterium] diamond 150 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31789204 31789204 PRJNA695273_P_NODE_132537_length_249_cov_0.875000_g131779_i0 PRJNA695273 132537 249 0.875 2.17875 Polyangiaceae bacterium 2268199 Bacteria Bacteria 46.2 0.00193   NR HOU92906.1 2268199 g131779 i0 36.5 0.759036144578313 63 40 75.9 0 216 28 71 133 HOU92906.1 hypothetical protein [Polyangiaceae bacterium] diamond 189 46.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32042596 32042596 PRJNA695273_P_NODE_61658_length_349_cov_1.076087_g60900_i0 PRJNA695273 61658 349 1.076087 3.75554363 Myxococcaceae bacterium 2484252 Bacteria Bacteria 52.4 1.1e-5   NR RYZ36905.1 2484252 g60900 i0 76.7 0.765042979942693 43 8 35.2 2 258 136 88 130 RYZ36905.1 MAG: hypothetical protein EOO72_10925 [Myxococcaceae bacterium] diamond 267 52.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
32327744 32327744 PRJNA695273_P_NODE_98999_length_281_cov_1.153846_g98241_i0 PRJNA695273 98999 281 1.153846 3.24230726 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 77.4 6.72e-16   NR MDO9067228.1 2026735 g98241 i0 43.2 1.47330960854093 74 42 79 0 2 223 2 75 MDO9067228.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 414 77.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32390622 32390622 PRJNA695273_P_NODE_127379_length_251_cov_0.865169_g126621_i0 PRJNA695273 127379 251 0.865169 2.17157419 Polyangiaceae bacterium 2268199 Bacteria Bacteria 43.5 0.0222   NR HEU4536418.1 2268199 g126621 i0 43.9 0.681274900398406 57 32 68.1 0 228 58 117 173 HEU4536418.1 TonB-dependent receptor plug domain-containing protein [Polyangiaceae bacterium] diamond 171 43.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32737968 32737968 PRJNA695273_P_NODE_126600_length_251_cov_0.865169_g125842_i0 PRJNA695273 126600 251 0.865169 2.17157419 Myxococcales bacterium 2026763 Bacteria Bacteria 149 2.29e-40   NR MBL8623730.1 2026763 g125842 i0 86.7 0.99203187250996006 83 11 99.2 0 251 3 393 475 MBL8623730.1 thiamine pyrophosphate-binding protein [Myxococcales bacterium] diamond 249 149 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;