RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA695140" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA695140 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27619819 27619819 PRJNA695140_S_NODE_10604_length_164_cov_2.834646_g10423_i0 PRJNA695140 10604 164 2.8346460000000002 4.64881944 Leviviridae sp. 2027243 Viruses Viruses 46.6 5.6e-4   NR URG15816.1 2027243 g10423 i0 42.6 0.98780487804878 54 31 98.8 0 3 164 825 878 URG15816.1 MAG: RNA dependent RNA polymerase, partial [Leviviridae sp.] diamond 162 46.6 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
28061693 28061693 PRJNA695140_S_NODE_10465_length_165_cov_2.976562_g10284_i0 PRJNA695140 10465 165 2.976562 4.9113273 Narnaviridae sp. 2583949 Viruses Viruses 76.3 2.01e-14   NR URG16935.1 2583949 g10284 i0 66 1.89090909090909 53 18 96.4 0 4 162 236 288 URG16935.1 MAG: RNA dependent RNA polymerase, partial [Narnaviridae sp.] diamond 312 76.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.
32010937 32010937 PRJNA695140_S_NODE_9838_length_169_cov_4.939394_g9657_i0 PRJNA695140 9838 169 4.939394 8.34757586 Narnaviridae sp. 2583949 Viruses Viruses 51.2 1.33e-5   NR URG16914.1 2583949 g9657 i0 42.1 1.84615384615385 57 30 95.9 2 164 3 220 276 URG16914.1 MAG: RNA dependent RNA polymerase, partial [Narnaviridae sp.] diamond 312 51.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;