RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA694770" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA694770 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30114162 30114162 PRJNA694770_P_NODE_92312_length_245_cov_0.866279_g92018_i0 PRJNA694770 92312 245 0.866279 2.12238355 Haliotis asinina 109174 Mollusca Mollusca 45.8 0.00305   NR XP_067653298.1 109174 g92018 i0 32.8 0.783673469387755 64 43 78.4 0 35 226 196 259 XP_067653298.1 putative ankyrin repeat protein RF_0381 [Haliotis asinina] diamond 192 45.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;