RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA694770" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA694770 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27536323 27536323 PRJNA694770_P_NODE_101083_length_234_cov_2.422360_g100789_i0 PRJNA694770 101083 234 2.42236 5.6683224 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.1 0.019   NR XP_067760121.1 348837 g100789 i0 78.3 0.884615384615385 23 5 29.5 0 159 91 65 87 XP_067760121.1 Rab1a [Spironucleus salmonicida] diamond 207 43.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
30840985 30840985 PRJNA694770_P_NODE_91074_length_245_cov_0.895349_g90780_i0 PRJNA694770 91074 245 0.895349 2.19360505 Hexamita inflata 28002 Fornicata other_Eukaryota 52 2e-5   NR CAK8746233.1 28002 g90780 i0 37.5 1.56734693877551 64 40 78.4 0 193 2 3 66 CAK8746233.1 HINF_020048 [Hexamita inflata] diamond 384 52 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;