RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA694557" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA694557 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27493432 27493432 PRJNA694557_P_NODE_20383_length_276_cov_1.517241_g20163_i0 PRJNA694557 20383 276 1.517241 4.18758516 Nitrososphaerota archaeon 2026795 Archaea Archaea 48.5 3.28e-5   NR MDE1819165.1 2026795 g20163 i0 53.8 0.423913043478261 39 18 42.4 0 158 274 3 41 MDE1819165.1 hypothetical protein [Nitrososphaerota archaeon] diamond 117 48.5 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30240605 30240605 PRJNA694557_P_NODE_2732_length_945_cov_5.836009_g2551_i0 PRJNA694557 2732 945 5.836009 55.15028505 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 51.6 0.0036   NR MEM4408956.1 2972665 g2551 i0 26.3 0.628571428571429 198 114 61.6 4 907 326 343 512 MEM4408956.1 hypothetical protein [Candidatus Caldarchaeum sp.] diamond 594 51.6 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
31884178 31884178 PRJNA694557_P_NODE_19597_length_283_cov_2.133333_g19377_i0 PRJNA694557 19597 283 2.133333 6.03733239 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 94 6.0700000000000005e-21   NR MDX1373372.1 2169593 g19377 i0 50.5 1.00706713780919 95 38 91.2 2 21 278 89 183 MDX1373372.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 285 94 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;