contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA692200" and tax_superkingdom = "Viruses"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27367337 | 27367337 | PRJNA692200_S_NODE_13603_length_196_cov_1.394558_g13546_i0 | PRJNA692200 | 13603 | 196 | 1.394558 | 2.73333368 | Podoviridae sp. ctbj_2 | 2675442 | Viruses | Viruses | 52 | 9.02e-6 | NR | AXH71985.1 | 2675442 | g13546 | i0 | 56 | 2.31122448979592 | 50 | 22 | 76.5 | 0 | 188 | 39 | 42 | 91 | AXH71985.1 MAG: type I restriction enzyme EcoKI subunit R [Podoviridae sp. ctbj_2] | diamond | 453 | 52 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Zobellviridae | Podoviridae sp. ctbj_2 | ||||
| 28850814 | 28850814 | PRJNA692200_S_NODE_10888_length_215_cov_4.915663_g10831_i0 | PRJNA692200 | 10888 | 215 | 4.915663 | 10.56867545 | Prokaryotic dsDNA virus sp. | 2591644 | Viruses | Viruses | 42.4 | 0.0201 | NR | QDP53382.1 | 2591644 | g10831 | i0 | 47.1 | 0.711627906976744 | 51 | 26 | 69.8 | 1 | 213 | 64 | 101 | 151 | QDP53382.1 MAG: hypothetical protein Unbinned6805contig1000_44 [Prokaryotic dsDNA virus sp.] | diamond | 153 | 42.4 | 1 | Viruses | Prokaryotic dsDNA virus sp. | ||||||||
| 30536231 | 30536231 | PRJNA692200_S_NODE_4093_length_309_cov_7.900000_g4036_i0 | PRJNA692200 | 4093 | 309 | 7.9 | 24.411 | Paundecimvirus | 2842942 | Viruses | Viruses | 122 | 2.2299999999999996e-31 | NR | YP_009304488.1 | 1784982 | g4036 | i0 | 83.1 | 2.06796116504854 | 71 | 12 | 68.9 | 0 | 244 | 32 | 1 | 71 | YP_009304488.1 putative capsid protein [Pseudomonas phage O4] | diamond | 639 | 123 | 0.991869918699187 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Zobellviridae | Paundecimvirus | Pseudomonas phage O4 | |||
| 30746092 | 30746092 | PRJNA692200_S_NODE_12374_length_204_cov_1.322581_g12317_i0 | PRJNA692200 | 12374 | 204 | 1.322581 | 2.69806524 | Prunus yellow spot-associated virus | 2600310 | Viruses | Viruses | 69.3 | 1.3e-12 | NR | QED94455.1 | 2600310 | g12317 | i0 | 66.7 | 0.661764705882353 | 45 | 15 | 66.2 | 0 | 1 | 135 | 135 | 179 | QED94455.1 coat protein [Prunus yellow spot-associated virus] | diamond | 135 | 69.3 | 1 | Viruses | Prunus yellow spot-associated virus | ||||||||
| 32548950 | 32548950 | PRJNA692200_S_NODE_11919_length_207_cov_2.107595_g11862_i0 | PRJNA692200 | 11919 | 207 | 2.107595 | 4.36272165 | Prokaryotic dsDNA virus sp. | 2591644 | Viruses | Viruses | 102 | 2.68e-23 | NR | QDP53377.1 | 2591644 | g11862 | i0 | 74.1 | 3.44927536231884 | 58 | 15 | 84.1 | 0 | 12 | 185 | 458 | 515 | QDP53377.1 MAG: putative terminase large subunit [Prokaryotic dsDNA virus sp.] | diamond | 714 | 102 | 1 | Viruses | Prokaryotic dsDNA virus sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;