contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA692200" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18524945 | 18524945 | PRJNA692200_S_NODE_695_length_474_cov_768.402353_g657_i0 | PRJNA692200 | 695 | 474 | 768.402353 | 3642.22715322 | [Pythium] brassicae (nom. inval.) | 1485010 | SAR_Eukaryotes | SAR_Eukaryotes | 153 | 9.74e-43 | NR | TYZ67175.1 | 1485010 | g657 | i0 | 60 | 9.26582278481013 | 130 | 47 | 80.4 | 2 | 472 | 92 | 154 | 281 | TYZ67175.1 hypothetical protein PybrP1_001669, partial [[Pythium] brassicae (nom. inval.)] | diamond | 4392 | 153 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | [Pythium] brassicae (nom. inval.) | ||
| 26650543 | 26650543 | PRJNA692200_S_NODE_15121_length_187_cov_2.007246_g15064_i0 | PRJNA692200 | 15121 | 187 | 2.007246 | 3.75355002 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 54.3 | 1.46e-6 | NR | KAF1795771.1 | 29920 | g15064 | i0 | 50 | 5.67914438502674 | 54 | 22 | 78.6 | 2 | 2 | 148 | 170 | 223 | KAF1795771.1 P-loop containing nucleoside triphosphate hydrolase [Phytophthora cactorum] | diamond | 1062 | 54.3 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cactorum | ||
| 28136328 | 28136328 | PRJNA692200_S_NODE_7445_length_251_cov_1.282178_g7388_i0 | PRJNA692200 | 7445 | 251 | 1.282178 | 3.21826678 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 58.2 | 4.79e-8 | NR | KAF0701472.1 | 120398 | g7388 | i0 | 37.6 | 2.03187250996016 | 85 | 44 | 90.8 | 3 | 12 | 239 | 58 | 142 | KAF0701472.1 hypothetical protein As57867_008018 [Aphanomyces stellatus] | diamond | 510 | 58.5 | 0.994871794871795 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 28578254 | 28578254 | PRJNA692200_S_NODE_22687_length_159_cov_2.236364_g22630_i0 | PRJNA692200 | 22687 | 159 | 2.236364 | 3.55581876 | Albugo | 65356 | SAR_Eukaryotes | SAR_Eukaryotes | 41.6 | 0.0306 | NR | CCI43855.1 | 65357 | g22630 | i0 | 38.8 | 2.66037735849057 | 49 | 25 | 83 | 1 | 154 | 23 | 268 | 316 | CCI43855.1 unnamed protein product [Albugo candida] | diamond | 423 | 42 | 0.990476190476191 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida | ||
| 29556848 | 29556848 | PRJNA692200_S_NODE_19410_length_168_cov_2.697479_g19353_i0 | PRJNA692200 | 19410 | 168 | 2.697479 | 4.53176472 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 69.7 | 4.12e-13 | NR | XP_067815842.1 | 4779 | g19353 | i0 | 91.7 | 1.28571428571429 | 36 | 3 | 64.3 | 0 | 166 | 59 | 130 | 165 | XP_067815842.1 uncharacterized protein CCR75_002732 [Bremia lactucae] | diamond | 216 | 69.7 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Bremia | Bremia lactucae | ||
| 30651018 | 30651018 | PRJNA692200_S_NODE_9173_length_232_cov_1.300546_g9116_i0 | PRJNA692200 | 9173 | 232 | 1.300546 | 3.01726672 | Aphanomyces cochlioides | 112091 | SAR_Eukaryotes | SAR_Eukaryotes | 106 | 8.51e-26 | NR | KAG9410527.1 | 112091 | g9116 | i0 | 94.7 | 2.14655172413793 | 57 | 3 | 73.7 | 0 | 9 | 179 | 234 | 290 | KAG9410527.1 hypothetical protein AC1031_018567 [Aphanomyces cochlioides] | diamond | 498 | 106 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 30714428 | 30714428 | PRJNA692200_S_NODE_17994_length_173_cov_4.435484_g17937_i0 | PRJNA692200 | 17994 | 173 | 4.435484 | 7.67338732 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 48.5 | 1.32e-4 | NR | XP_067741692.1 | 164328 | g17937 | i0 | 57.1 | 0.728323699421965 | 42 | 17 | 71.1 | 1 | 173 | 51 | 624 | 665 | XP_067741692.1 Long chain acyl-CoA synthetase 7, peroxisomal [Phytophthora ramorum] | diamond | 126 | 48.5 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 30777737 | 30777737 | PRJNA692200_S_NODE_9774_length_226_cov_1.367232_g9717_i0 | PRJNA692200 | 9774 | 226 | 1.367232 | 3.08994432 | Nothophytophthora sp. Chile5 | 2483409 | SAR_Eukaryotes | SAR_Eukaryotes | 62 | 4.8e-9 | NR | RLN55150.1 | 2483409 | g9717 | i0 | 46.7 | 0.79646017699115 | 60 | 31 | 78.3 | 1 | 223 | 47 | 452 | 511 | RLN55150.1 hypothetical protein BBJ28_00027179, partial [Nothophytophthora sp. Chile5] | diamond | 180 | 62 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Nothophytophthora | Nothophytophthora sp. Chile5 | ||
| 31199306 | 31199306 | PRJNA692200_S_NODE_19975_length_167_cov_1.110169_g19918_i0 | PRJNA692200 | 19975 | 167 | 1.110169 | 1.85398223 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 77.8 | 5.7e-15 | NR | KAH9192935.1 | 100861 | g19918 | i0 | 86.8 | 1.36526946107784 | 38 | 5 | 68.3 | 0 | 163 | 50 | 461 | 498 | KAH9192935.1 hypothetical protein AeNC1_005084 [Aphanomyces euteiches] | diamond | 228 | 77.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 32137430 | 32137430 | PRJNA692200_S_NODE_17378_length_176_cov_2.377953_g17321_i0 | PRJNA692200 | 17378 | 176 | 2.377953 | 4.18519728 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 49.7 | 2.06e-5 | NR | RHY74090.1 | 112090 | g17321 | i0 | 54.2 | 0.818181818181818 | 48 | 17 | 73.3 | 1 | 6 | 134 | 108 | 155 | RHY74090.1 hypothetical protein DYB30_004665 [Aphanomyces astaci] | diamond | 144 | 49.7 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;