RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA692200" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA692200 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12152071 12152071 PRJNA692200_S_NODE_3990_length_311_cov_1288.145038_g3933_i0 PRJNA692200 3990 311 1288.1450380000001 4006.13106818 Rozella allomycis CSF55 988480 Fungi Fungi 83.6 6.28e-17   NR EPZ34692.1 988480 g3933 i0 66.2 3.02893890675241 65 21 61.7 1 277 86 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 83.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29513931 29513931 PRJNA692200_S_NODE_7670_length_248_cov_1.854271_g7613_i0 PRJNA692200 7670 248 1.854271 4.59859208 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 103 7.76e-24   NR PJF17710.1 1246581 g7613 i0 57.3 3.93145161290323 82 35 99.2 0 3 248 361 442 PJF17710.1 Aspartyl-tRNA synthetase, variant 2 [Paramicrosporidium saccamoebae] diamond 975 103 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
32422182 32422182 PRJNA692200_S_NODE_22499_length_160_cov_2.432432_g22442_i0 PRJNA692200 22499 160 2.432432 3.8918912 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 57.8 5.28e-8   NR PJF19907.1 1246581 g22442 i0 56.6 0.99375 53 20 99.4 1 2 160 191 240 PJF19907.1 Isobutyryl-CoA dehydrogenase [Paramicrosporidium saccamoebae] diamond 159 57.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;